C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAP2C, member of RAS oncogene family
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000053593 Rap2c-001 ENSMUSG00000050029 10090 - X:51003912-51018018 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartLiverLungMuscleOvaryPlacentaTestisENSMUST00000053593
Transcript ID Adipose Bladder Brain Breast Heart Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000053593 3.087±0.97 1.357±0.17 4.211±1.72 4.098±0.46 2.360±1.15 3.881±1.33 1.213±0.00 6.941±0.21 7.985±1.85 17.466±6.83 0.859±0.34

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000T1 CIL_0000T1_0002 CGP X:50895180-51018018
CIL_0000GI CIL_0000GI_0003 CGP X:51003912-51206532

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003713 IEA transcription coactivator activity
GO:0005737 IEA cytoplasm
GO:0005829 IDA cytosol
GO:0005886 IEA plasma membrane
GO:0006184 IEA GTP catabolic process
GO:0016020 IDA membrane
GO:0019003 IEA GDP binding
GO:0030336 IDA negative regulation of cell migration
GO:0031954 IDA positive regulation of protein autophosphorylation
GO:0032486 IDA Rap protein signal transduction
GO:0055037 IDA recycling endosome
GO:0055038 IDA recycling endosome membrane
GO:0061097 IDA regulation of protein tyrosine kinase activity
GO:0070062 IEA extracellular vesicular exosome
GO:2001141 IEA regulation of RNA biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000342983 RAP2C-001 protein_coding Homo_sapiens 0 2172
ENST00000370874 RAP2C-002 protein_coding Homo_sapiens 0 1884
ENST00000460462 RAP2C-003 processed_transcript Homo_sapiens 0 957
ENST00000620646 RAP2C-201 protein_coding Homo_sapiens 0 2172

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