C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000UQ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000141699-ENSG00000131462 CGP 9606 17:42579513-42615234
GeneTranscriptPositionBiotype
ENSG00000131462 (TUBG1)
tubulin, gamma 1 		ENST00000251413 (TUBG1-001) 42609676-42615234 protein_coding
ENST00000588056 (TUBG1-003) 42609686-42612266 retained_intron
ENST00000589613 (TUBG1-002) 42609716-42611267 retained_intron
ENST00000589688 (TUBG1-005) 42609689-42615221 nonsense_mediated_decay
ENST00000591509 (TUBG1-004) 42609686-42613911 protein_coding
ENSG00000141699 (FAM134C)
family with sequence similarity 134, member C 		ENST00000309428 (FAM134C-001) 42579515-42609384 protein_coding
ENST00000585726 (FAM134C-008) 42585125-42609384 nonsense_mediated_decay
ENST00000585894 (FAM134C-002) 42581329-42610623 protein_coding
ENST00000586796 (FAM134C-009) 42587695-42609384 retained_intron
ENST00000586870 (FAM134C-004) 42581613-42609386 nonsense_mediated_decay
ENST00000588423 (FAM134C-005) 42586768-42610603 protein_coding
ENST00000589007 (FAM134C-011) 42582735-42586957 retained_intron
ENST00000589797 (FAM134C-003) 42579513-42609377 nonsense_mediated_decay
ENST00000590035 (FAM134C-012) 42585125-42586432 retained_intron
ENST00000590541 (FAM134C-007) 42592132-42609324 nonsense_mediated_decay
ENST00000591547 (FAM134C-006) 42585201-42610593 protein_coding
ENST00000593251 (FAM134C-010) 42585211-42609375 nonsense_mediated_decay
ENSG00000280183 (RP11-400F19.12)
 ENST00000623270 (RP11-400F19.12-001) 42598643-42599177 TEC
CIL_0000UQ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000017802-ENSMUSG00000035198 CGP 10090 11:101096322-101126419
GeneTranscriptPositionBiotype
ENSMUSG00000017802 (Fam134c)
family with sequence similarity 134, member C 		ENSMUST00000017946 (Fam134c-001) 101096513-101119893 protein_coding
ENSMUST00000107295 (Fam134c-201) 101096322-101119843 protein_coding
ENSMUST00000142733 (Fam134c-003) 101098000-101119765 processed_transcript
ENSMUST00000147201 (Fam134c-004) 101098583-101119893 processed_transcript
ENSMUST00000154513 (Fam134c-002) 101096322-101119893 processed_transcript
ENSMUSG00000035198 (Tubg1)
tubulin, gamma 1 		ENSMUST00000043680 (Tubg1-001) 101119938-101126419 protein_coding
ENSMUST00000137844 (Tubg1-002) 101124500-101125828 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000UQ_0001ENSG00000131462ENST00000251413ENST00000588056ENST00000589613ENST00000589688ENST00000591509ENSG00000141699ENST00000309428ENST00000585726ENST00000585894ENST00000586796ENST00000586870ENST00000588423ENST00000589007ENST00000589797ENST00000590035ENST00000590541ENST00000591547ENST00000593251ENSG00000280183ENST00000623270CIL_0000UQ_0002ENSMUSG00000017802ENSMUST00000017946ENSMUST00000107295ENSMUST00000142733ENSMUST00000147201ENSMUST00000154513ENSMUSG00000035198ENSMUST00000043680ENSMUST00000137844
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000UQ_0001ENSG00000131462ENST00000251413ENST00000591509ENSG00000141699ENST00000309428ENST00000585894ENST00000586870ENST00000589007ENSG00000280183ENST00000623270CIL_0000UQ_0002ENSMUSG00000017802ENSMUST00000017946ENSMUST00000107295ENSMUST00000142733ENSMUST00000147201ENSMUSG00000035198ENSMUST00000043680ENSMUST00000137844
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000131462 ENST00000251413 13.620±0.00 14.974±0.00 3.451±0.00 13.726±4.09 16.801±0.00 5.242±1.78 8.304±5.93 22.373±0.00 6.652±3.28 8.138±5.47 24.481±19.65 22.190±7.06 21.818±4.44 108.998±0.70
ENST00000588056 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589613 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589688 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591509 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 28.582±0.00 16.968±0.00 137.657±0.00
ENSG00000141699 ENST00000309428 12.331±0.00 16.906±0.00 N/A 9.294±0.00 6.358±5.15 1.837±0.00 2.457±0.00 4.621±2.81 3.038±0.58 2.284±0.00 10.600±0.00 10.584±4.33 9.295±1.76 14.131±1.42
ENST00000585726 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585894 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.127±0.00 N/A N/A N/A N/A
ENST00000586796 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586870 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.644±0.00 N/A N/A N/A
ENST00000588423 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589007 N/A N/A 9.960±0.00 N/A 10.866±0.00 N/A N/A 14.805±0.00 N/A 9.978±0.00 N/A N/A N/A N/A
ENST00000589797 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590035 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590541 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591547 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000593251 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000280183 ENST00000623270 0.142±0.00 0.419±0.00 0.891±0.00 0.157±0.00 0.606±0.53 N/A 0.204±0.02 0.273±0.00 N/A N/A N/A 0.441±0.36 0.088±0.01 0.286±0.25
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000017802 ENSMUST00000017946 35.278±4.68 N/A 17.745±2.05 17.639±5.63 32.862±5.45 36.160±7.90 10.999±2.47 27.893±7.06 23.513±6.48 26.083±3.75 13.584±2.90 25.884±10.67 25.635±6.98 17.068±6.78
ENSMUST00000107295 N/A 28.163±5.16 N/A N/A 23.128±3.83 15.582±4.93 N/A N/A 7.463±2.24 N/A N/A 18.207±3.13 N/A N/A
ENSMUST00000142733 N/A 15.454±3.58 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.644±1.19
ENSMUST00000147201 N/A 22.245±2.38 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154513 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000035198 ENSMUST00000043680 6.300±1.78 8.955±4.14 3.495±1.89 11.325±6.14 3.462±1.69 4.151±0.40 3.734±1.18 4.444±0.90 6.438±3.27 3.001±0.42 13.520±1.00 6.549±7.76 18.238±14.60 8.270±1.20
ENSMUST00000137844 N/A N/A N/A N/A 1.156±0.28 N/A N/A N/A N/A N/A N/A 2.560±0.84 N/A N/A

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