C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: tubulin, gamma 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000137844 Tubg1-002 ENSMUSG00000035198 10090 + 11:101124500-101125828 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastOvaryENSMUST00000137844
Transcript ID Breast Ovary
ENSMUST00000137844 1.156±0.28 2.560±0.84

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000UQ CIL_0000UQ_0002 CGP 11:101096322-101126419
CIL_00068T CIL_00068T_0002 CGP 11:101119938-101161787

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000026701 tubg1-001 protein_coding Danio_rerio 0 381
ENST00000251412 TUBG2-001 protein_coding Homo_sapiens 0 579
ENST00000251413 TUBG1-001 protein_coding Homo_sapiens 0 573
ENST00000418303 TUBG1P-001 processed_pseudogene Homo_sapiens 0 488
ENST00000588870 TUBG2-002 retained_intron Homo_sapiens 0 579
ENST00000589688 TUBG1-005 nonsense_mediated_decay Homo_sapiens 0 573

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