C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0000V7_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000071552-ENSDARG00000090718 CGP 7955 12:19992045-20000552
GeneTranscriptPositionBiotype
ENSDARG00000090718 (OTTDARG00000020547)
Uncharacterized protein
ENSDART00000124902 (OTTDARG00000020547-201) 19995985-19999195 protein_coding
ENSDART00000129869 (OTTDARG00000020547-202) 19995985-20000552 protein_coding
CIL_0000V7_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000089529-ENSDARG00000071551 CGP 7955 12:19921622-19930325
GeneTranscriptPositionBiotype
ENSDARG00000071551 (xrcc6)
X-ray repair complementing defective repair in Chinese hamster cells 6
ENSDART00000105856 (xrcc6-201) 19925438-19930324 protein_coding
ENSDART00000105858 (xrcc6-001) 19925361-19930325 protein_coding
CIL_0000V7_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000100418-ENSG00000196419 CGP 9606 22:41598028-41664048
GeneTranscriptPositionBiotype
ENSG00000100418 (DESI1)
desumoylating isopeptidase 1
ENST00000263256 (DESI1-001) 41598028-41621096 protein_coding
ENST00000463886 (DESI1-002) 41602001-41604225 processed_transcript
ENST00000468151 (DESI1-003) 41600893-41602523 processed_transcript
ENST00000482612 (DESI1-004) 41602975-41604087 retained_intron
ENSG00000196419 (XRCC6)
X-ray repair complementing defective repair in Chinese hamster cells 6
ENST00000359308 (XRCC6-003) 41621350-41664039 protein_coding
ENST00000360079 (XRCC6-001) 41621119-41664039 protein_coding
ENST00000402580 (XRCC6-002) 41621295-41664048 protein_coding
ENST00000405506 (XRCC6-005) 41621983-41664034 protein_coding
ENST00000405878 (XRCC6-006) 41621461-41664039 protein_coding
ENST00000428575 (XRCC6-201) 41621163-41664048 protein_coding
ENST00000464116 (XRCC6-007) 41621285-41628318 retained_intron
ENST00000478914 (XRCC6-008) 41656953-41661699 retained_intron
ENSG00000200332 (Y_RNA)
Y RNA
ENST00000363462 (Y_RNA.1-338) 41648089-41648190 misc_RNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000V7_0001ENSDARG00000090718ENSDART00000124902ENSDART00000129869CIL_0000V7_0002ENSDARG00000071551ENSDART00000105856ENSDART00000105858CIL_0000V7_0003ENSG00000100418ENST00000263256ENST00000463886ENST00000468151ENST00000482612ENSG00000196419ENST00000359308ENST00000360079ENST00000402580ENST00000405506ENST00000405878ENST00000428575ENST00000464116ENST00000478914ENSG00000200332ENST00000363462
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000V7_0001ENSDARG00000090718ENSDART00000124902CIL_0000V7_0002ENSDARG00000071551ENSDART00000105856ENSDART00000105858CIL_0000V7_0003ENSG00000100418ENST00000263256ENST00000468151ENSG00000196419ENST00000359308ENST00000360079ENST00000402580ENST00000405506ENST00000405878ENST00000464116ENSG00000200332ENST00000363462
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000090718 ENSDART00000124902 N/A N/A N/A N/A N/A N/A 0.091±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000129869 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000071551 ENSDART00000105856 N/A N/A N/A 0.535±0.41 N/A N/A N/A N/A N/A N/A 0.195±0.00 N/A N/A N/A
ENSDART00000105858 N/A N/A N/A 0.861±0.56 N/A N/A 0.401±0.16 0.634±0.26 0.108±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000100418 ENST00000263256 8.810±0.00 7.373±0.00 1.654±0.00 12.447±4.57 5.137±2.48 7.884±0.00 7.137±5.22 11.804±7.28 11.674±9.57 7.675±4.99 4.548±2.05 10.725±4.51 8.270±0.88 11.377±1.17
ENST00000463886 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468151 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 52.168±0.00
ENST00000482612 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000196419 ENST00000359308 N/A N/A 2.223±0.00 5.014±0.00 N/A N/A N/A N/A N/A 3.617±0.00 4.558±0.00 N/A N/A N/A
ENST00000360079 N/A N/A N/A 12.697±0.04 5.847±0.00 N/A 9.566±0.00 16.915±0.00 17.155±0.00 11.223±0.00 3.057±0.00 39.509±0.61 N/A 79.435±0.00
ENST00000402580 23.158±0.00 35.549±0.00 N/A 23.529±0.00 20.344±0.00 33.447±0.00 15.363±0.00 29.654±0.00 13.579±0.00 42.777±0.00 30.171±0.00 45.517±23.36 36.313±16.31 62.554±1.39
ENST00000405506 10.351±0.00 24.500±0.00 N/A 6.690±0.00 15.687±0.00 20.389±2.21 N/A 11.418±0.00 7.739±0.00 N/A 7.441±0.00 22.275±0.00 22.322±0.00 34.194±0.00
ENST00000405878 45.645±0.00 31.367±0.00 8.939±0.00 27.681±16.51 20.626±9.95 28.723±0.00 20.301±14.84 18.508±12.36 12.637±0.58 28.843±24.02 29.701±22.18 59.350±29.80 112.701±25.04 98.771±15.10
ENST00000428575 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464116 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 138.663±0.00 N/A
ENST00000478914 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000200332 ENST00000363462 N/A 0.410±0.00 N/A N/A 0.395±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.898±0.00

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