C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000VE_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000162949-ENSG00000158089 CGP 9606 2:30722771-31155202
GeneTranscriptPositionBiotype
ENSG00000158089 (GALNT14)
polypeptide N-acetylgalactosaminyltransferase 14 		ENST00000324589 (GALNT14-003) 30910467-31138147 protein_coding
ENST00000349752 (GALNT14-001) 30910467-31138726 protein_coding
ENST00000406653 (GALNT14-004) 30910468-31129624 protein_coding
ENST00000424136 (GALNT14-005) 30945842-31138055 nonsense_mediated_decay
ENST00000430167 (GALNT14-002) 30924198-31138503 protein_coding
ENST00000455477 (GALNT14-006) 30924785-31138055 nonsense_mediated_decay
ENST00000461193 (GALNT14-016) 30955929-31138021 processed_transcript
ENST00000464038 (GALNT14-011) 30932117-31155202 processed_transcript
ENST00000475320 (GALNT14-010) 30910599-30924823 processed_transcript
ENST00000481023 (GALNT14-009) 30932167-30991209 processed_transcript
ENST00000485468 (GALNT14-015) 31065125-31146978 processed_transcript
ENST00000486564 (GALNT14-007) 30910699-30955684 processed_transcript
ENST00000490212 (GALNT14-013) 30966272-31129640 processed_transcript
ENST00000496397 (GALNT14-008) 30955730-31129377 processed_transcript
ENST00000498206 (GALNT14-014) 30966277-31126861 processed_transcript
ENSG00000162949 (CAPN13)
calpain 13 		ENST00000295055 (CAPN13-001) 30722771-30807446 protein_coding
ENST00000450650 (CAPN13-003) 30722771-30743518 nonsense_mediated_decay
ENST00000458085 (CAPN13-004) 30741374-30807426 nonsense_mediated_decay
ENST00000465450 (CAPN13-007) 30743144-30751226 retained_intron
ENST00000465960 (CAPN13-005) 30758046-30820542 processed_transcript
ENST00000485248 (CAPN13-006) 30764248-30807426 nonsense_mediated_decay
ENST00000490786 (CAPN13-008) 30729541-30732484 processed_transcript
ENSG00000216093 (AC009305.2)
 ENST00000401274 (AC009305.2-201) 31035553-31035644 miRNA
ENSG00000230118 (AC092569.2)
 ENST00000455192 (AC092569.2-001) 30746444-30746701 processed_pseudogene
CIL_0000VE_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000043705-ENSMUSG00000024064 CGP 10090 17:73306464-73710453
GeneTranscriptPositionBiotype
ENSMUSG00000024064 (Galnt14)
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 		ENSMUST00000024858 (Galnt14-001) 73493228-73710451 protein_coding
ENSMUST00000112591 (Galnt14-003) 73507580-73710415 protein_coding
ENSMUST00000146565 (Galnt14-002) 73572784-73710453 retained_intron
ENSMUSG00000043705 (Capn13)
calpain 13 		ENSMUST00000095208 (Capn13-201) 73306464-73399296 protein_coding
ENSMUSG00000090168 (D630014O11Rik)
RIKEN cDNA D630014O11 gene 		ENSMUST00000160562 (D630014O11Rik-001) 73635591-73640220 sense_intronic

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000VE_0001ENSG00000158089ENST00000324589ENST00000349752ENST00000406653ENST00000424136ENST00000430167ENST00000455477ENST00000461193ENST00000464038ENST00000475320ENST00000481023ENST00000485468ENST00000486564ENST00000490212ENST00000496397ENST00000498206ENSG00000162949ENST00000295055ENST00000450650ENST00000458085ENST00000465450ENST00000465960ENST00000485248ENST00000490786ENSG00000216093ENST00000401274ENSG00000230118ENST00000455192CIL_0000VE_0002ENSMUSG00000024064ENSMUST00000024858ENSMUST00000112591ENSMUST00000146565ENSMUSG00000043705ENSMUST00000095208ENSMUSG00000090168ENSMUST00000160562
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000VE_0001ENSG00000158089ENST00000324589ENST00000349752ENST00000430167ENST00000455477ENST00000461193ENST00000464038ENST00000475320ENST00000485468ENST00000486564ENST00000498206ENSG00000162949ENST00000295055ENST00000450650ENST00000458085ENST00000465960ENST00000485248ENST00000490786ENSG00000216093ENST00000401274ENSG00000230118ENST00000455192CIL_0000VE_0002ENSMUSG00000024064ENSMUST00000024858ENSMUST00000112591ENSMUST00000146565ENSMUSG00000043705ENSMUST00000095208ENSMUSG00000090168ENSMUST00000160562
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000158089 ENST00000324589 N/A N/A N/A N/A N/A 0.019±0.00 N/A N/A 0.169±0.00 N/A 0.030±0.00 N/A 0.032±0.00 N/A
ENST00000349752 N/A 1.010±0.00 4.644±0.00 1.095±0.16 0.699±0.00 0.055±0.00 0.073±0.00 23.153±0.00 N/A N/A N/A 0.569±0.50 N/A 1.925±0.00
ENST00000406653 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000424136 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000430167 0.224±0.00 N/A 2.731±0.00 1.269±0.00 N/A N/A N/A N/A N/A 0.169±0.00 0.086±0.00 0.661±0.00 0.043±0.00 0.808±0.00
ENST00000455477 0.406±0.00 N/A N/A 0.842±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000461193 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.152±0.00 N/A
ENST00000464038 N/A N/A N/A N/A N/A N/A 0.036±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000475320 0.435±0.00 0.890±0.00 N/A 0.623±0.00 N/A 0.285±0.00 0.059±0.00 6.072±5.76 0.122±0.00 0.348±0.00 N/A N/A 0.073±0.01 N/A
ENST00000481023 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485468 N/A N/A N/A N/A 0.662±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486564 N/A 0.695±0.00 N/A 0.860±0.00 0.329±0.00 0.101±0.00 N/A 0.055±0.00 N/A 0.235±0.00 N/A 0.404±0.07 N/A 2.159±0.00
ENST00000490212 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496397 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498206 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.304±0.00 N/A N/A N/A N/A
ENSG00000162949 ENST00000295055 N/A N/A N/A 0.826±0.00 0.172±0.07 0.289±0.00 N/A 1.047±0.00 N/A 1.737±0.00 N/A 0.123±0.08 N/A 0.058±0.00
ENST00000450650 N/A 0.042±0.00 N/A N/A 0.101±0.00 0.231±0.00 0.006±0.00 N/A N/A N/A 0.006±0.00 0.094±0.00 N/A N/A
ENST00000458085 N/A N/A N/A N/A N/A N/A N/A N/A 0.065±0.00 N/A N/A 0.091±0.00 N/A 0.088±0.00
ENST00000465450 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465960 N/A 0.083±0.00 N/A 0.431±0.00 0.409±0.00 1.548±0.00 N/A N/A 0.586±0.00 N/A N/A N/A N/A 0.053±0.00
ENST00000485248 N/A N/A N/A 0.214±0.00 N/A N/A N/A N/A 0.612±0.00 N/A N/A N/A N/A N/A
ENST00000490786 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.411±0.00 N/A N/A
ENSG00000216093 ENST00000401274 N/A N/A N/A 0.199±0.00 0.188±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000230118 ENST00000455192 N/A N/A N/A 0.068±0.00 N/A N/A N/A 0.063±0.00 N/A N/A 0.054±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024064 ENSMUST00000024858 0.116±0.06 0.562±0.12 0.138±0.04 4.646±2.23 0.103±0.02 0.049±0.01 N/A 12.110±1.18 0.064±0.03 0.026±0.00 0.017±0.00 0.344±0.23 0.193±0.13 0.668±0.16
ENSMUST00000112591 0.366±0.32 0.809±0.37 0.167±0.04 1.297±0.00 0.142±0.05 0.038±0.03 0.030±0.01 6.965±2.18 0.064±0.02 0.027±0.01 N/A 0.205±0.10 0.185±0.00 0.560±0.37
ENSMUST00000146565 N/A N/A N/A N/A N/A N/A N/A N/A 0.014±0.00 N/A N/A 0.050±0.00 N/A N/A
ENSMUSG00000043705 ENSMUST00000095208 0.094±0.06 N/A 8.725±1.12 0.019±0.00 0.058±0.01 10.375±2.57 0.077±0.05 0.337±0.16 0.014±0.01 0.244±0.19 0.063±0.00 0.042±0.02 0.011±0.01 0.197±0.13
ENSMUSG00000090168 ENSMUST00000160562 N/A N/A 0.003±0.00 0.045±0.03 0.012±0.00 N/A N/A 0.369±0.06 0.015±0.00 N/A N/A 0.043±0.01 0.002±0.00 N/A

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