C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000XX_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000045525-ENSDARG00000042469 CGP 7955 4:24841858-24923817
GeneTranscriptPositionBiotype
ENSDARG00000042469 (ndufa12)
NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12 		ENSDART00000142491 (ndufa12-001) 24916974-24923817 protein_coding
ENSDARG00000045525 (tmcc3)
transmembrane and coiled-coil domain family 3 		ENSDART00000066946 (tmcc3-201) 24843246-24847118 protein_coding
ENSDART00000122881 (tmcc3-001) 24841858-24883981 protein_coding
ENSDART00000146658 (tmcc3-002) 24846746-24899462 protein_coding
CIL_0000XX_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000057704-ENSG00000184752 CGP 9606 12:94567124-95003770
GeneTranscriptPositionBiotype
ENSG00000057704 (TMCC3)
transmembrane and coiled-coil domain family 3 		ENST00000261226 (TMCC3-001) 94567124-94650562 protein_coding
ENST00000548918 (TMCC3-003) 94582127-94616420 protein_coding
ENST00000551457 (TMCC3-002) 94568569-94616061 protein_coding
ENST00000552239 (TMCC3-004) 94609789-94616151 processed_transcript
ENSG00000184752 (NDUFA12)
NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12 		ENST00000327772 (NDUFA12-001) 94971333-95003770 protein_coding
ENST00000538372 (NDUFA12-006) 94971333-94994353 retained_intron
ENST00000546788 (NDUFA12-009) 94971478-95003748 nonsense_mediated_decay
ENST00000547157 (NDUFA12-003) 94971332-95003700 protein_coding
ENST00000547447 (NDUFA12-008) 94897092-94924806 processed_transcript
ENST00000547986 (NDUFA12-002) 94971336-95003713 protein_coding
ENST00000550187 (NDUFA12-007) 94971332-94997447 processed_transcript
ENST00000551991 (NDUFA12-005) 94971333-95003608 nonsense_mediated_decay
ENST00000552205 (NDUFA12-004) 94897055-95003660 nonsense_mediated_decay
ENSG00000208038 (MIR492)
microRNA 492 		ENST00000385303 (MIR492-201) 94834398-94834513 miRNA
ENSG00000216306 (KRT19P2)
keratin 19 pseudogene 2 		ENST00000405395 (KRT19P2-002) 94834454-94835028 processed_transcript
ENST00000557173 (KRT19P2-001) 94834147-94835158 transcribed_processed_pseudogene
ENSG00000257847 (LSM3P2)
LSM3 pseudogene 2 		ENST00000551246 (LSM3P2-001) 94590821-94591093 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000XX_0001ENSDARG00000042469ENSDART00000142491ENSDARG00000045525ENSDART00000066946ENSDART00000122881ENSDART00000146658CIL_0000XX_0002ENSG00000057704ENST00000261226ENST00000548918ENST00000551457ENST00000552239ENSG00000184752ENST00000327772ENST00000538372ENST00000546788ENST00000547157ENST00000547447ENST00000547986ENST00000550187ENST00000551991ENST00000552205ENSG00000208038ENST00000385303ENSG00000216306ENST00000405395ENST00000557173ENSG00000257847ENST00000551246
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000XX_0001ENSDARG00000042469ENSDART00000142491ENSDARG00000045525ENSDART00000066946ENSDART00000122881CIL_0000XX_0002ENSG00000057704ENST00000261226ENST00000548918ENST00000551457ENSG00000184752ENST00000327772ENST00000546788ENST00000547157ENST00000547986ENSG00000208038ENST00000385303ENSG00000216306ENST00000405395ENST00000557173ENSG00000257847ENST00000551246
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000042469 ENSDART00000142491 N/A N/A N/A 72.174±50.74 N/A N/A 104.861±91.97 60.082±0.00 5.577±0.00 N/A 131.869±0.00 N/A N/A N/A
ENSDARG00000045525 ENSDART00000066946 N/A N/A N/A 4.000±0.00 N/A N/A 3.421±0.35 N/A 1.648±0.00 N/A 3.142±0.00 N/A N/A N/A
ENSDART00000122881 N/A N/A N/A 8.548±2.68 N/A N/A 5.254±0.78 9.971±1.06 4.434±0.00 N/A 9.206±0.00 N/A N/A N/A
ENSDART00000146658 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000057704 ENST00000261226 5.515±0.00 1.552±0.00 N/A 1.460±1.13 2.002±0.28 1.898±1.52 0.294±0.16 2.297±0.00 0.970±0.45 0.565±0.14 2.345±2.14 1.643±0.63 3.881±0.64 1.266±0.88
ENST00000548918 N/A N/A 2.985±0.00 N/A N/A 6.476±0.00 N/A N/A N/A 3.343±0.00 0.775±0.00 4.193±0.00 N/A N/A
ENST00000551457 2.938±0.00 N/A N/A 3.440±0.00 N/A 1.884±0.00 0.228±0.15 0.815±0.00 0.268±0.13 1.227±0.04 2.011±1.93 0.784±0.38 1.623±0.55 N/A
ENST00000552239 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000184752 ENST00000327772 58.140±0.00 73.717±0.00 2.130±0.00 65.210±22.95 37.292±24.03 51.787±38.66 78.935±44.20 40.213±26.64 22.260±7.34 25.021±11.98 60.836±17.11 44.234±38.69 47.216±21.02 48.180±34.18
ENST00000538372 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000546788 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 27.252±0.00 30.380±0.00 17.555±0.00
ENST00000547157 N/A N/A 2.329±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547447 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547986 N/A N/A N/A N/A N/A 4.926±0.00 N/A N/A N/A N/A N/A 3.741±1.56 N/A N/A
ENST00000550187 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551991 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552205 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000208038 ENST00000385303 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.609±0.00
ENSG00000216306 ENST00000405395 N/A N/A N/A N/A N/A N/A N/A 0.169±0.00 0.271±0.00 N/A N/A 0.115±0.04 N/A N/A
ENST00000557173 N/A 0.063±0.00 N/A 0.106±0.00 N/A N/A N/A N/A 0.092±0.00 N/A N/A N/A N/A N/A
ENSG00000257847 ENST00000551246 0.238±0.00 0.301±0.00 N/A 0.050±0.00 0.866±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A

Loading