C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000327772 NDUFA12-001 ENSG00000184752 9606 - 12:94971333-95003770 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000327772
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000327772 58.140±0.00 73.717±0.00 2.130±0.00 65.210±22.95 37.292±24.03 51.787±38.66 78.935±44.20 40.213±26.64 22.260±7.34 25.021±11.98 60.836±17.11 44.234±38.69 47.216±21.02 48.180±34.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000XX CIL_0000XX_0002 CGP 12:94567124-95003770
CIL_0000XY CIL_0000XY_0002 CGP 12:94897055-95073703

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IDA cytoplasm
GO:0005739 IDA mitochondrion
GO:0005743 TAS mitochondrial inner membrane
GO:0005747 IDA mitochondrial respiratory chain complex I
GO:0006979 IDA response to oxidative stress
GO:0007585 NAS respiratory gaseous exchange
GO:0008137 NAS NADH dehydrogenase (ubiquinone) activity
GO:0009055 IEA electron carrier activity
GO:0022904 TAS respiratory electron transport chain
GO:0044237 TAS cellular metabolic process
GO:0044281 TAS small molecule metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000179990 Ndufa12-201 protein_coding Mus_musculus 0 468
ENSMUST00000020209 Ndufa12-001 protein_coding Mus_musculus 0 468
ENSMUST00000118998 Gm15920-001 processed_pseudogene Mus_musculus 0 435
ENSMUST00000125379 Ndufa12-003 retained_intron Mus_musculus 0 289
ENSMUST00000135292 Ndufa12-002 nonsense_mediated_decay Mus_musculus 7e-23 111

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