C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: LSM3 pseudogene 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000551246 LSM3P2-001 ENSG00000257847 9606 + 12:94590821-94591093 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastENST00000551246
Transcript ID Adipose Adrenal Brain Breast
ENST00000551246 0.238±0.00 0.301±0.00 0.050±0.00 0.866±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000XX CIL_0000XX_0002 CGP 12:94567124-95003770

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000040607 Lsm3-001 protein_coding Mus_musculus 0 270
ENSMUST00000126253 Lsm3-003 retained_intron Mus_musculus 0 244
ENSMUST00000123569 Lsm3-002 retained_intron Mus_musculus 6e-30 134

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