C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000546788 NDUFA12-009 ENSG00000184752 9606 - 12:94971478-95003748 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryPlacentaTestisENST00000546788
Transcript ID Ovary Placenta Testis
ENST00000546788 27.252±0.00 30.380±0.00 17.555±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000XX CIL_0000XX_0002 CGP 12:94567124-95003770
CIL_0000XY CIL_0000XY_0002 CGP 12:94897055-95073703

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IDA cytoplasm
GO:0005739 IDA mitochondrion
GO:0008137 IEA NADH dehydrogenase (ubiquinone) activity
GO:0009055 IEA electron carrier activity
GO:0016020 IEA membrane
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000179990 Ndufa12-201 protein_coding Mus_musculus 0 289
ENSMUST00000125379 Ndufa12-003 retained_intron Mus_musculus 0 289
ENSMUST00000020209 Ndufa12-001 protein_coding Mus_musculus 0 289
ENSMUST00000118998 Gm15920-001 processed_pseudogene Mus_musculus 0 250
ENSMUST00000135292 Ndufa12-002 nonsense_mediated_decay Mus_musculus 6e-23 111

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