C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0000YT_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000018040-ENSDARG00000037496 CGP 7955 15:43353995-43580937
GeneTranscriptPositionBiotype
ENSDARG00000018040 (msantd4)
Myb/SANT-like DNA-binding domain containing 4 with coiled-coils
ENSDART00000028011 (msantd4-201) 43354121-43357049 protein_coding
ENSDART00000155763 (msantd4-001) 43353995-43358322 protein_coding
ENSDARG00000037496 (gria4a)
glutamate receptor, ionotropic, AMPA 4a
ENSDART00000042083 (gria4a-201) 43381643-43580937 protein_coding
ENSDART00000054599 (gria4a-202) 43380829-43580784 protein_coding
ENSDART00000155456 (gria4a-001) 43380826-43394100 protein_coding
ENSDARG00000084099 (5S_rRNA)
5S ribosomal RNA
ENSDART00000119499 (5S_rRNA.518-201) 43521314-43521430 rRNA
CIL_0000YT_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000041124-ENSMUSG00000025892 CGP 10090 9:4383535-4796234
GeneTranscriptPositionBiotype
ENSMUSG00000025892 (Gria4)
glutamate receptor, ionotropic, AMPA4 (alpha 4)
ENSMUST00000027020 (Gria4-201) 4417899-4796234 protein_coding
ENSMUST00000063508 (Gria4-202) 4417899-4796234 protein_coding
ENSMUST00000163309 (Gria4-203) 4478263-4796234 protein_coding
ENSMUSG00000041124 (Msantd4)
Myb/SANT-like DNA-binding domain containing 4 with coiled-coils
ENSMUST00000047173 (Msantd4-201) 4383535-4386861 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000YT_0001ENSDARG00000018040ENSDART00000028011ENSDART00000155763ENSDARG00000037496ENSDART00000042083ENSDART00000054599ENSDART00000155456ENSDARG00000084099ENSDART00000119499CIL_0000YT_0002ENSMUSG00000025892ENSMUST00000027020ENSMUST00000063508ENSMUST00000163309ENSMUSG00000041124ENSMUST00000047173
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000YT_0001ENSDARG00000018040ENSDART00000028011ENSDART00000155763ENSDARG00000037496ENSDART00000042083ENSDART00000054599ENSDART00000155456ENSDARG00000084099ENSDART00000119499CIL_0000YT_0002ENSMUSG00000025892ENSMUST00000027020ENSMUST00000063508ENSMUST00000163309ENSMUSG00000041124ENSMUST00000047173
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000018040 ENSDART00000028011 N/A N/A N/A N/A N/A N/A N/A N/A 0.058±0.00 N/A N/A N/A N/A N/A
ENSDART00000155763 N/A N/A N/A 0.694±0.47 N/A N/A 0.356±0.03 N/A 0.123±0.00 N/A 0.072±0.00 N/A N/A N/A
ENSDARG00000037496 ENSDART00000042083 N/A N/A N/A N/A N/A N/A N/A 0.042±0.00 0.018±0.00 N/A N/A N/A N/A N/A
ENSDART00000054599 N/A N/A N/A 7.688±0.00 N/A N/A 0.016±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000155456 N/A N/A N/A 25.492±10.03 N/A N/A 0.029±0.00 N/A 0.015±0.00 N/A N/A N/A N/A N/A
ENSDARG00000084099 ENSDART00000119499 N/A N/A N/A 84.918±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025892 ENSMUST00000027020 1.100±1.09 0.137±0.05 N/A 4.615±2.36 0.214±0.22 0.340±0.08 0.018±0.01 0.280±0.13 0.020±0.01 0.041±0.04 0.003±0.00 0.101±0.06 0.008±0.00 0.194±0.11
ENSMUST00000063508 0.694±0.91 0.104±0.09 1.961±0.08 3.738±1.85 0.155±0.17 0.169±0.00 0.014±0.01 0.595±0.21 0.027±0.03 0.011±0.00 0.015±0.01 0.054±0.04 0.090±0.07 0.357±0.16
ENSMUST00000163309 0.800±0.65 0.316±0.22 N/A 4.686±0.68 0.090±0.04 0.284±0.11 0.007±0.00 0.280±0.10 0.036±0.01 N/A N/A 0.287±0.16 0.042±0.02 N/A
ENSMUSG00000041124 ENSMUST00000047173 2.410±1.75 N/A 6.559±0.09 14.627±2.02 2.182±1.66 2.639±0.20 N/A 0.828±0.00 2.554±0.52 1.621±0.75 3.870±0.79 5.283±5.02 7.383±2.74 4.198±0.00

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