C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0000ZD_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000045936-ENSDARG00000008852 CGP 7955 7:16636712-16799176
GeneTranscriptPositionBiotype
ENSDARG00000008852 (elp4)
elongation protein 4 homolog (S. cerevisiae)
ENSDART00000002498 (elp4-201) 16671553-16799176 protein_coding
ENSDART00000145993 (elp4-001) 16671551-16761183 protein_coding
CIL_0000ZD_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027168-ENSMUSG00000027167 CGP 10090 2:105668900-105904564
GeneTranscriptPositionBiotype
ENSMUSG00000027167 (Elp4)
elongation protein 4 homolog (S. cerevisiae)
ENSMUST00000028588 (Elp4-003) 105731448-105865982 protein_coding
ENSMUST00000122965 (Elp4-001) 105701027-105904564 protein_coding
ENSMUST00000148441 (Elp4-002) 105866070-105904483 processed_transcript
ENSMUST00000152272 (Elp4-004) 105792079-105814322 retained_intron
ENSMUSG00000084870 (Gm13954)
predicted gene 13954
ENSMUST00000123441 (Gm13954-001) 105708999-105710098 antisense
ENSMUSG00000086029 (Pax6os1)
paired box 6 opposite strand 1
ENSMUST00000126948 (Pax6os1-002) 105536939-105670280 antisense
ENSMUST00000149133 (Pax6os1-001) 105536080-105670330 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000ZD_0001ENSDARG00000008852ENSDART00000002498ENSDART00000145993CIL_0000ZD_0002ENSMUSG00000027167ENSMUST00000028588ENSMUST00000122965ENSMUST00000148441ENSMUST00000152272ENSMUSG00000084870ENSMUST00000123441ENSMUSG00000086029ENSMUST00000126948ENSMUST00000149133
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000ZD_0001ENSDARG00000008852ENSDART00000002498ENSDART00000145993CIL_0000ZD_0002ENSMUSG00000027167ENSMUST00000028588ENSMUST00000122965ENSMUST00000148441ENSMUST00000152272ENSMUSG00000084870ENSMUST00000123441ENSMUSG00000086029ENSMUST00000126948ENSMUST00000149133
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000008852 ENSDART00000002498 N/A N/A N/A 2.013±1.55 N/A N/A 3.985±0.00 5.518±0.00 0.870±0.00 N/A 2.340±0.00 N/A N/A N/A
ENSDART00000145993 N/A N/A N/A 0.884±0.39 N/A N/A 1.992±0.81 N/A 0.548±0.00 N/A 0.916±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027167 ENSMUST00000028588 N/A N/A 1.877±0.00 N/A 1.985±0.00 N/A N/A N/A N/A N/A 1.053±0.25 2.863±0.13 1.926±0.82 N/A
ENSMUST00000122965 3.092±0.56 2.818±1.00 2.415±0.16 3.448±2.28 2.484±1.02 2.565±0.48 1.451±0.31 2.134±0.24 3.300±0.99 2.421±0.27 0.682±0.23 3.480±1.88 1.245±0.64 1.946±0.86
ENSMUST00000148441 N/A 9.826±0.00 N/A 13.705±0.00 4.418±1.50 3.004±0.36 N/A N/A 4.268±0.97 3.194±0.00 N/A 8.239±3.90 N/A 10.865±0.00
ENSMUST00000152272 N/A N/A 2.390±0.00 N/A N/A N/A 1.574±0.00 N/A 4.964±0.76 N/A N/A N/A N/A 1.441±0.84
ENSMUSG00000084870 ENSMUST00000123441 N/A N/A 0.058±0.00 0.059±0.02 0.148±0.02 N/A N/A N/A 0.124±0.04 N/A 0.109±0.00 0.072±0.00 0.090±0.03 0.239±0.20
ENSMUSG00000086029 ENSMUST00000126948 N/A N/A 0.015±0.00 0.062±0.04 N/A N/A N/A N/A N/A N/A N/A N/A 0.010±0.00 0.090±0.00
ENSMUST00000149133 N/A N/A N/A 0.043±0.03 N/A 0.067±0.00 N/A N/A 0.010±0.00 N/A N/A N/A N/A 0.044±0.02

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