C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: paired box 6 opposite strand 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000086029 Pax6os1 10090 - 2:105536080-105670330 antisense
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000126948 Pax6os1-002 105536939-105670280 antisense
  ENSMUST00000149133 Pax6os1-001 105536080-105670330 antisense

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonLiverPlacentaTestisENSMUST00000126948ENSMUST00000149133
Transcript ID Bladder Brain Colon Liver Placenta Testis
ENSMUST00000126948 0.015±0.00 0.062±0.04 N/A N/A 0.010±0.00 0.090±0.00
ENSMUST00000149133 N/A 0.043±0.03 0.067±0.00 0.010±0.00 N/A 0.044±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008NI CIL_0008NI_0002 VISTA 2:105033715-105635145
CIL_00096J CIL_00096J_0002 VISTA 2:105147292-105748402
CIL_0007PY CIL_0007PY_0002 VISTA 2:105215855-105816711
CIL_0007JA CIL_0007JA_0005 UCNEbase 2:105301487-106575818
CIL_000914 CIL_000914_0002 VISTA 2:105311041-105914025
CIL_00017T CIL_00017T_0002 CGP 2:105386291-105697364
CIL_0007XG CIL_0007XG_0002 VISTA 2:105389599-105991449
CIL_0008UP CIL_0008UP_0002 VISTA 2:105418757-106020536
CIL_0007UQ CIL_0007UQ_0002 VISTA 2:105478530-106080039
CIL_0008KI CIL_0008KI_0002 VISTA 2:105533387-106134697

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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