C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00011B_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000004840-ENSDARG00000025340 CGP 7955 22:10755238-10774085
GeneTranscriptPositionBiotype
ENSDARG00000004840 (rassf1)
Ras association (RalGDS/AF-6) domain family 1 		ENSDART00000038465 (rassf1-201) 10757078-10768663 protein_coding
ENSDART00000126119 (rassf1-202) 10757122-10768202 protein_coding
ENSDART00000142265 (rassf1-001) 10755238-10768670 protein_coding
ENSDART00000145459 (rassf1-002) 10761876-10768670 protein_coding
ENSDARG00000095950 (si:dkey-42i9.15)
si:dkey-42i9.15 		ENSDART00000148752 (si:dkey-42i9.15-001) 10768168-10771147 lincRNA
CIL_00011B_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000010067-ENSMUSG00000010054 CGP 10090 9:107551555-107566108
GeneTranscriptPositionBiotype
ENSMUSG00000010054 (Tusc2)
tumor suppressor candidate 2 		ENSMUST00000010198 (Tusc2-201) 107563255-107566108 protein_coding
ENSMUSG00000010067 (Rassf1)
Ras association (RalGDS/AF-6) domain family member 1 		ENSMUST00000010211 (Rassf1-004) 107554656-107562263 protein_coding
ENSMUST00000093786 (Rassf1-001) 107551555-107562263 protein_coding
ENSMUST00000121635 (Rassf1-005) 107556611-107562263 protein_coding
ENSMUST00000122225 (Rassf1-002) 107551567-107562263 protein_coding
ENSMUST00000125080 (Rassf1-009) 107551562-107554506 retained_intron
ENSMUST00000125386 (Rassf1-008) 107557935-107561838 retained_intron
ENSMUST00000129320 (Rassf1-007) 107557942-107560435 retained_intron
ENSMUST00000144129 (Rassf1-006) 107556743-107562263 retained_intron
ENSMUST00000156198 (Rassf1-003) 107551590-107562263 nonsense_mediated_decay
ENSMUSG00000097099 (Gm9917)
predicted gene 9917 		ENSMUST00000180865 (Gm9917-201) 107558810-107568412 lincRNA
ENSMUST00000181099 (Gm9917-202) 107562850-107568415 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00011B_0001ENSDARG00000004840ENSDART00000038465ENSDART00000126119ENSDART00000142265ENSDART00000145459ENSDARG00000095950ENSDART00000148752CIL_00011B_0002ENSMUSG00000010054ENSMUST00000010198ENSMUSG00000010067ENSMUST00000010211ENSMUST00000093786ENSMUST00000121635ENSMUST00000122225ENSMUST00000125080ENSMUST00000125386ENSMUST00000129320ENSMUST00000144129ENSMUST00000156198ENSMUSG00000097099ENSMUST00000180865ENSMUST00000181099
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00011B_0001ENSDARG00000004840ENSDART00000038465ENSDART00000126119ENSDART00000142265ENSDART00000145459ENSDARG00000095950ENSDART00000148752CIL_00011B_0002ENSMUSG00000010054ENSMUST00000010198ENSMUSG00000010067ENSMUST00000010211ENSMUST00000093786ENSMUSG00000097099ENSMUST00000180865
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000004840 ENSDART00000038465 N/A N/A N/A N/A N/A N/A 13.619±1.80 5.495±1.11 N/A N/A N/A N/A N/A N/A
ENSDART00000126119 N/A N/A N/A N/A N/A N/A N/A N/A 0.751±0.00 N/A N/A N/A N/A N/A
ENSDART00000142265 N/A N/A N/A 3.193±0.00 N/A N/A 14.404±0.00 1.273±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000145459 N/A N/A N/A N/A N/A N/A 7.060±2.84 3.853±0.00 N/A N/A N/A N/A N/A N/A
ENSDARG00000095950 ENSDART00000148752 N/A N/A N/A N/A N/A N/A 46.428±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000010054 ENSMUST00000010198 28.482±0.66 36.489±1.08 23.277±3.09 34.669±5.05 30.375±9.88 41.474±11.70 17.176±4.12 40.885±3.85 22.092±4.37 30.599±5.25 19.028±3.05 34.924±12.81 23.882±12.57 13.838±5.86
ENSMUSG00000010067 ENSMUST00000010211 9.102±0.37 N/A 10.340±2.97 N/A N/A 9.395±0.00 4.262±0.07 N/A 6.380±0.28 14.244±2.05 3.614±0.30 7.302±0.00 10.563±1.66 15.697±5.34
ENSMUST00000093786 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.502±0.00 N/A N/A
ENSMUST00000121635 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000122225 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000125080 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000125386 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129320 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144129 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156198 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000097099 ENSMUST00000180865 3.955±0.20 N/A 2.704±0.58 2.359±1.01 4.011±0.83 5.781±0.61 1.754±0.09 4.007±0.16 2.159±0.28 15.577±0.39 1.919±0.33 3.688±1.68 4.261±0.93 4.204±1.70
ENSMUST00000181099 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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