C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00014N_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000012397-ENSDARG00000036869 CGP 7955 23:31678289-31794275
GeneTranscriptPositionBiotype
ENSDARG00000012397 (eya4)
eyes absent homolog 4 (Drosophila) 		ENSDART00000126920 (eya4-201) 31678289-31745433 protein_coding
ENSDART00000131352 (eya4-002) 31678787-31745433 protein_coding
ENSDART00000133002 (eya4-004) 31678919-31745433 protein_coding
ENSDART00000138625 (eya4-003) 31678919-31745433 protein_coding
ENSDART00000143425 (eya4-001) 31678694-31751076 protein_coding
ENSDARG00000036869 (tcf21)
transcription factor 21 		ENSDART00000053539 (tcf21-001) 31792848-31794275 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_00014N_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000112319-ENSG00000118526 CGP 9606 6:133240598-133895553
GeneTranscriptPositionBiotype
ENSG00000112319 (EYA4)
EYA transcriptional coactivator and phosphatase 4 		ENST00000355167 (EYA4-201) 133241357-133532119 protein_coding
ENST00000355286 (EYA4-008) 133241418-133530874 protein_coding
ENST00000367895 (EYA4-001) 133241351-133532120 protein_coding
ENST00000421413 (EYA4-004) 133325211-133468569 processed_transcript
ENST00000430974 (EYA4-007) 133241351-133531413 protein_coding
ENST00000431403 (EYA4-011) 133274781-133529039 protein_coding
ENST00000441015 (EYA4-005) 133241373-133248853 processed_transcript
ENST00000452339 (EYA4-006) 133240598-133528902 protein_coding
ENST00000497350 (EYA4-003) 133462121-133462734 retained_intron
ENST00000525614 (EYA4-010) 133360205-133461125 processed_transcript
ENST00000525849 (EYA4-002) 133241631-133530226 protein_coding
ENST00000531861 (EYA4-012) 133274781-133512964 processed_transcript
ENST00000531901 (EYA4-009) 133241586-133529530 protein_coding
ENST00000532518 (EYA4-013) 133462713-133513029 processed_transcript
ENSG00000118526 (TCF21)
transcription factor 21 		ENST00000237316 (TCF21-002) 133889335-133895553 protein_coding
ENST00000367882 (TCF21-001) 133889138-133895553 protein_coding
ENSG00000218213 (FTH1P26)
ferritin, heavy polypeptide 1 pseudogene 26 		ENST00000406512 (FTH1P26-001) 133676729-133677429 processed_pseudogene
ENSG00000223542 (RP1-283K11.3)
 ENST00000412954 (RP1-283K11.3-001) 133435077-133439464 antisense
ENSG00000223586 (LINC01312)
long intergenic non-protein coding RNA 1312 		ENST00000412745 (LINC01312-002) 133837184-133851800 lincRNA
ENST00000456347 (LINC01312-001) 133821147-133851288 lincRNA
ENSG00000238059 (HSPE1P21)
heat shock 10kDa protein 1 pseudogene 21 		ENST00000438283 (HSPE1P21-001) 133510386-133510693 processed_pseudogene
ENSG00000272428 (RP11-704J17.5)
 ENST00000606160 (RP11-704J17.5-001) 133540784-133541174 lincRNA

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00014N_0001ENSDARG00000012397ENSDART00000126920ENSDART00000131352ENSDART00000133002ENSDART00000138625ENSDART00000143425ENSDARG00000036869ENSDART00000053539CIL_00014N_0002ENSG00000112319ENST00000355167ENST00000355286ENST00000367895ENST00000421413ENST00000430974ENST00000431403ENST00000441015ENST00000452339ENST00000497350ENST00000525614ENST00000525849ENST00000531861ENST00000531901ENST00000532518ENSG00000118526ENST00000237316ENST00000367882ENSG00000218213ENST00000406512ENSG00000223542ENST00000412954ENSG00000223586ENST00000412745ENST00000456347ENSG00000238059ENST00000438283ENSG00000272428ENST00000606160
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00014N_0001ENSDARG00000012397ENSDART00000126920ENSDART00000133002ENSDART00000143425ENSDARG00000036869ENSDART00000053539CIL_00014N_0002ENSG00000112319ENST00000355167ENST00000355286ENST00000367895ENST00000430974ENST00000452339ENST00000525849ENST00000531861ENST00000531901ENSG00000118526ENST00000237316ENST00000367882ENSG00000218213ENST00000406512ENSG00000223542ENST00000412954ENSG00000223586ENST00000412745ENST00000456347ENSG00000238059ENST00000438283ENSG00000272428ENST00000606160
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000012397 ENSDART00000126920 N/A N/A N/A 0.471±0.36 N/A N/A 1.750±0.60 0.886±0.00 N/A N/A 5.684±0.00 N/A N/A N/A
ENSDART00000131352 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000133002 N/A N/A N/A N/A N/A N/A 1.874±0.42 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000138625 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000143425 N/A N/A N/A N/A N/A N/A 1.544±0.00 0.805±0.00 N/A N/A N/A N/A N/A N/A
ENSDARG00000036869 ENSDART00000053539 N/A N/A N/A 0.119±0.00 N/A N/A 10.944±10.15 1.084±0.27 0.160±0.00 N/A 0.116±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000112319 ENST00000355167 N/A N/A N/A N/A 0.124±0.00 N/A N/A N/A 0.525±0.00 N/A N/A N/A N/A 0.764±0.00
ENST00000355286 N/A N/A N/A 0.097±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000367895 N/A N/A 1.712±0.00 N/A N/A N/A 1.867±0.00 N/A N/A N/A 4.860±0.00 N/A N/A 0.516±0.00
ENST00000421413 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000430974 N/A N/A N/A 0.295±0.00 N/A N/A 2.280±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000431403 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000441015 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000452339 N/A 0.143±0.00 N/A 0.305±0.00 N/A N/A N/A N/A 1.686±0.00 N/A N/A N/A N/A N/A
ENST00000497350 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000525614 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000525849 N/A N/A N/A N/A 0.154±0.00 N/A N/A N/A 0.082±0.00 N/A N/A N/A N/A N/A
ENST00000531861 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.742±0.00 N/A N/A N/A
ENST00000531901 N/A N/A N/A 0.264±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532518 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000118526 ENST00000237316 0.314±0.00 N/A N/A N/A N/A 2.882±0.77 N/A 3.683±3.05 0.204±0.00 4.229±0.00 N/A 2.549±1.97 14.875±0.00 1.508±0.08
ENST00000367882 0.190±0.00 0.258±0.00 4.206±0.00 N/A 0.696±0.00 2.819±1.92 0.798±0.00 3.501±0.00 1.457±1.27 22.462±17.99 N/A 7.780±7.11 27.336±9.42 3.702±0.00
ENSG00000218213 ENST00000406512 N/A N/A N/A N/A N/A 0.677±0.00 N/A N/A N/A 0.174±0.00 N/A 0.047±0.00 N/A N/A
ENSG00000223542 ENST00000412954 N/A N/A N/A N/A 0.023±0.00 0.128±0.00 0.042±0.00 0.023±0.00 0.176±0.00 0.235±0.03 N/A 0.678±0.00 0.048±0.00 0.048±0.00
ENSG00000223586 ENST00000412745 N/A 0.013±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.028±0.00 0.590±0.39
ENST00000456347 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.261±0.03
ENSG00000238059 ENST00000438283 N/A N/A 0.331±0.00 N/A N/A N/A N/A N/A N/A N/A 0.073±0.00 0.407±0.14 N/A 0.153±0.06
ENSG00000272428 ENST00000606160 N/A N/A N/A 0.069±0.00 N/A N/A 0.086±0.00 0.181±0.00 N/A N/A 0.433±0.00 0.140±0.00 N/A 0.060±0.02

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