C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00016E_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000243444-ENSG00000157654 CGP 9606 9:109640788-110172512
GeneTranscriptPositionBiotype
ENSG00000228053 (RP11-151F5.2)
 ENST00000418441 (RP11-151F5.2-001) 110024881-110025358 processed_pseudogene
ENSG00000232939 (RP11-406O23.2)
 ENST00000449258 (RP11-406O23.2-001) 109760360-109772043 antisense
ENSG00000241978 (AKAP2)
A kinase (PRKA) anchor protein 2 		ENST00000259318 (AKAP2-003) 110125501-110168811 protein_coding
ENST00000374525 (AKAP2-001) 110048696-110172512 protein_coding
ENST00000434623 (AKAP2-006) 110048598-110169909 protein_coding
ENST00000471798 (AKAP2-004) 110127646-110136334 processed_transcript
ENST00000480388 (AKAP2-007) 110090197-110138426 protein_coding
ENST00000482335 (AKAP2-002) 110138171-110168889 processed_transcript
ENST00000485762 (AKAP2-005) 110148528-110168406 processed_transcript
ENST00000495980 (AKAP2-008) 110048698-110168633 nonsense_mediated_decay

Homo sapiens Ensembl (GRCh38)

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CIL_00016E_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000090053-ENSMUSG00000089945 CGP 10090 4:57434247-57896982
GeneTranscriptPositionBiotype
ENSMUSG00000073846 (Gm12526)
predicted gene 12526 		ENSMUST00000154462 (Gm12526-001) 57757739-57763901 processed_transcript
ENSMUSG00000081615 (Gm12539)
predicted gene 12539 		ENSMUST00000121549 (Gm12539-001) 57455561-57457549 processed_pseudogene
ENSMUSG00000089286 (Gm24277)
predicted gene, 24277 		ENSMUST00000158661 (Gm24277-201) 57762607-57762710 snRNA
ENSMUSG00000089945 (Palm2Akap2)
Palm2-Akap2 readthrough transcript 		ENSMUST00000098066 (Palm2Akap2-002) 57568179-57896982 nonsense_mediated_decay
ENSMUST00000126465 (Palm2Akap2-003) 57568330-57854584 nonsense_mediated_decay
ENSMUST00000150412 (Palm2Akap2-001) 57637823-57894718 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00016E_0001ENSG00000228053ENST00000418441ENSG00000232939ENST00000449258ENSG00000241978ENST00000259318ENST00000374525ENST00000434623ENST00000471798ENST00000480388ENST00000482335ENST00000485762ENST00000495980CIL_00016E_0002ENSMUSG00000073846ENSMUST00000154462ENSMUSG00000081615ENSMUST00000121549ENSMUSG00000089286ENSMUST00000158661ENSMUSG00000089945ENSMUST00000098066ENSMUST00000126465ENSMUST00000150412
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00016E_0001ENSG00000228053ENST00000418441ENSG00000232939ENST00000449258ENSG00000241978ENST00000259318ENST00000374525ENST00000434623CIL_00016E_0002ENSMUSG00000073846ENSMUST00000154462ENSMUSG00000081615ENSMUST00000121549ENSMUSG00000089286ENSMUST00000158661ENSMUSG00000089945ENSMUST00000098066ENSMUST00000150412
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000228053 ENST00000418441 0.026±0.00 0.027±0.00 N/A N/A N/A 0.251±0.00 0.084±0.03 0.027±0.00 N/A N/A 0.025±0.00 0.056±0.01 N/A N/A
ENSG00000232939 ENST00000449258 N/A 0.124±0.00 N/A N/A N/A 0.099±0.00 0.021±0.00 N/A N/A N/A N/A 0.058±0.00 0.030±0.00 N/A
ENSG00000241978 ENST00000259318 N/A N/A 3.360±0.00 N/A 5.156±0.00 2.672±0.00 2.683±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000374525 107.327±0.00 18.737±0.00 N/A 6.819±0.00 13.479±11.61 11.496±10.36 11.985±7.77 11.705±0.00 1.630±0.00 47.136±31.02 4.209±0.00 5.348±1.96 15.682±4.42 0.846±0.00
ENST00000434623 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.792±0.00 23.378±0.00 1.750±0.00
ENST00000471798 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480388 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482335 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485762 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495980 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000073846 ENSMUST00000154462 0.230±0.03 0.250±0.14 0.150±0.03 0.128±0.07 0.141±0.05 0.133±0.00 0.122±0.09 0.199±0.15 0.017±0.01 0.185±0.10 N/A 0.285±0.17 0.293±0.21 0.199±0.10
ENSMUSG00000081615 ENSMUST00000121549 N/A 0.130±0.00 N/A 0.107±0.03 N/A N/A 0.094±0.04 N/A N/A 0.175±0.08 N/A 0.173±0.14 0.020±0.01 N/A
ENSMUSG00000089286 ENSMUST00000158661 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 20.671±0.00 N/A N/A
ENSMUSG00000089945 ENSMUST00000098066 N/A N/A N/A N/A 2.969±0.60 N/A 3.057±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000126465 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150412 N/A N/A N/A 12.891±0.00 N/A N/A N/A N/A N/A N/A N/A 11.541±0.00 20.423±1.71 2.209±0.50

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