C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: Palm2-Akap2 readthrough transcript
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000126465 Palm2Akap2-003 ENSMUSG00000089945 10090 + 4:57568330-57854584 nonsense_mediated_decay

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001GE CIL_0001GE_0002 CGP 4:57190841-57712016
CIL_00016E CIL_00016E_0002 CGP 4:57434247-57896982
CIL_0007PS CIL_0007PS_0002 VISTA 4:57545561-58147767
CIL_0007HX CIL_0007HX_0002 CGP 4:57568179-57896984

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008360 IEA regulation of cell shape
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000302798 PALM2-AKAP2-003 protein_coding Homo_sapiens 0 614
ENST00000314527 PALM2-001 protein_coding Homo_sapiens 0 1458
ENST00000374530 PALM2-AKAP2-001 protein_coding Homo_sapiens 0 625
ENST00000374531 PALM2-002 protein_coding Homo_sapiens 0 835
ENST00000413420 PALM2-AKAP2-002 protein_coding Homo_sapiens 0 1491
ENST00000465091 PALM2-003 retained_intron Homo_sapiens 0 422
ENST00000483909 PALM2-004 protein_coding Homo_sapiens 0 835
ENST00000497711 PALM2-005 protein_coding Homo_sapiens 0 627

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