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C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | Palm2-Akap2 readthrough transcript | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000126465  |
Palm2Akap2-003 |
ENSMUSG00000089945 |
10090 | + |
4:57568330-57854584  |
nonsense_mediated_decay |
|
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Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0001GE | CIL_0001GE_0002 | CGP | 4:57190841-57712016 |
| CIL_00016E | CIL_00016E_0002 | CGP | 4:57434247-57896982 |
| CIL_0007PS | CIL_0007PS_0002 | VISTA | 4:57545561-58147767 |
| CIL_0007HX | CIL_0007HX_0002 | CGP | 4:57568179-57896984 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0008360 | IEA | regulation of cell shape |
| GO:0016020 | IEA | membrane |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000302798
|
PALM2-AKAP2-003 | protein_coding | Homo_sapiens | 0 | 614 |
|
ENST00000314527
|
PALM2-001 | protein_coding | Homo_sapiens | 0 | 1458 |
|
ENST00000374530
|
PALM2-AKAP2-001 | protein_coding | Homo_sapiens | 0 | 625 |
|
ENST00000374531
|
PALM2-002 | protein_coding | Homo_sapiens | 0 | 835 |
|
ENST00000413420
|
PALM2-AKAP2-002 | protein_coding | Homo_sapiens | 0 | 1491 |
|
ENST00000465091
|
PALM2-003 | retained_intron | Homo_sapiens | 0 | 422 |
|
ENST00000483909
|
PALM2-004 | protein_coding | Homo_sapiens | 0 | 835 |
|
ENST00000497711
|
PALM2-005 | protein_coding | Homo_sapiens | 0 | 627 |
