C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Palm2-Akap2 readthrough transcript
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000150412 Palm2Akap2-001 ENSMUSG00000089945 10090 + 4:57637823-57894718 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000150412
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000150412 12.891±0.00 11.541±0.00 20.423±1.71 2.209±0.50

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001GE CIL_0001GE_0002 CGP 4:57190841-57712016
CIL_00016E CIL_00016E_0002 CGP 4:57434247-57896982
CIL_0007PS CIL_0007PS_0002 VISTA 4:57545561-58147767
CIL_0007HX CIL_0007HX_0002 CGP 4:57568179-57896984

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000259318 AKAP2-003 protein_coding Homo_sapiens 0 1567
ENST00000302798 PALM2-AKAP2-003 protein_coding Homo_sapiens 0 1567
ENST00000314527 PALM2-001 protein_coding Homo_sapiens 0 440
ENST00000374525 AKAP2-001 protein_coding Homo_sapiens 0 1567
ENST00000374530 PALM2-AKAP2-001 protein_coding Homo_sapiens 0 1857
ENST00000374531 PALM2-002 protein_coding Homo_sapiens 0 442
ENST00000413420 PALM2-AKAP2-002 protein_coding Homo_sapiens 0 440
ENST00000434623 AKAP2-006 protein_coding Homo_sapiens 0 1857
ENST00000465091 PALM2-003 retained_intron Homo_sapiens 0 436
ENST00000471798 AKAP2-004 processed_transcript Homo_sapiens 0 228
ENST00000480388 AKAP2-007 protein_coding Homo_sapiens 0 1175
ENST00000482335 AKAP2-002 processed_transcript Homo_sapiens 0 375
ENST00000483909 PALM2-004 protein_coding Homo_sapiens 0 442
ENST00000485762 AKAP2-005 processed_transcript Homo_sapiens 0 305
ENST00000495980 AKAP2-008 nonsense_mediated_decay Homo_sapiens 0 307
ENST00000497711 PALM2-005 protein_coding Homo_sapiens 0 442

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