C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00017J_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000181031-ENSG00000187624 CGP 9606 17:212389-423719
GeneTranscriptPositionBiotype
ENSG00000187624 (C17orf97)
chromosome 17 open reading frame 97 		ENST00000360127 (C17orf97-001) 410327-414666 protein_coding
ENST00000491373 (C17orf97-002) 410361-414305 protein_coding
ENST00000571106 (C17orf97-003) 410337-421097 protein_coding
ENST00000575151 (C17orf97-004) 414095-423719 nonsense_mediated_decay
ENSG00000262061 (RP11-1260E13.4)
 ENST00000570711 (RP11-1260E13.4-001) 331205-333488 antisense
ENST00000573601 (RP11-1260E13.4-003) 332142-333444 antisense
ENST00000574432 (RP11-1260E13.4-201) 331205-333485 processed_transcript
ENST00000575743 (RP11-1260E13.4-004) 331234-333485 retained_intron
ENST00000575899 (RP11-1260E13.4-002) 331515-332151 retained_intron
ENSG00000262294 (RP11-1260E13.2)
 ENST00000572499 (RP11-1260E13.2-001) 352638-357581 antisense
ENSG00000262558 (RP11-1260E13.3)
 ENST00000571512 (RP11-1260E13.3-001) 354737-356882 antisense
CIL_00017J_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000020847-ENSMUSG00000053783 CGP 10090 11:75830999-76003569
GeneTranscriptPositionBiotype
ENSMUSG00000020847 (Rph3al)
rabphilin 3A-like (without C2 domains) 		ENSMUST00000021208 (Rph3al-002) 75899726-75925891 protein_coding
ENSMUST00000066504 (Rph3al-201) 75832137-75911062 protein_coding
ENSMUST00000108420 (Rph3al-003) 75900743-75937697 protein_coding
ENSMUST00000121287 (Rph3al-001) 75830999-75937738 protein_coding
ENSMUST00000152035 (Rph3al-004) 75906572-75938429 protein_coding
ENSMUSG00000053783 (1700016K19Rik)
RIKEN cDNA 1700016K19 gene 		ENSMUST00000066408 (1700016K19Rik-001) 75999912-76003569 protein_coding
ENSMUSG00000087322 (Gm16075)
predicted gene 16075 		ENSMUST00000135873 (Gm16075-001) 75860969-75861494 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00017J_0001ENSG00000187624ENST00000360127ENST00000491373ENST00000571106ENST00000575151ENSG00000262061ENST00000570711ENST00000573601ENST00000574432ENST00000575743ENST00000575899ENSG00000262294ENST00000572499ENSG00000262558ENST00000571512CIL_00017J_0002ENSMUSG00000020847ENSMUST00000021208ENSMUST00000066504ENSMUST00000108420ENSMUST00000121287ENSMUST00000152035ENSMUSG00000053783ENSMUST00000066408ENSMUSG00000087322ENSMUST00000135873
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00017J_0001ENSG00000187624ENST00000360127ENST00000491373ENST00000571106ENST00000575151ENSG00000262061ENST00000570711ENST00000574432ENST00000575743ENST00000575899ENSG00000262294ENST00000572499ENSG00000262558ENST00000571512CIL_00017J_0002ENSMUSG00000020847ENSMUST00000021208ENSMUST00000066504ENSMUST00000121287ENSMUST00000152035ENSMUSG00000053783ENSMUST00000066408ENSMUSG00000087322ENSMUST00000135873
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000187624 ENST00000360127 0.157±0.00 0.941±0.00 0.199±0.00 1.907±1.14 0.843±0.00 0.354±0.04 0.479±0.38 4.635±0.00 N/A 1.193±0.00 2.215±0.00 2.481±2.36 0.345±0.01 15.090±2.20
ENST00000491373 0.239±0.00 0.732±0.00 1.030±0.00 1.441±0.25 0.406±0.20 0.398±0.17 0.656±0.60 4.843±0.00 0.813±0.00 1.650±0.93 5.205±0.00 1.325±0.97 0.413±0.09 20.141±1.03
ENST00000571106 0.240±0.00 N/A N/A N/A N/A N/A N/A N/A 0.053±0.00 N/A N/A N/A N/A N/A
ENST00000575151 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.479±0.29 N/A N/A
ENSG00000262061 ENST00000570711 N/A N/A N/A N/A N/A N/A 0.291±0.00 N/A N/A N/A N/A N/A 1.269±0.00 N/A
ENST00000573601 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574432 N/A N/A N/A 0.348±0.00 N/A N/A N/A N/A N/A N/A 0.822±0.00 3.591±0.00 N/A N/A
ENST00000575743 N/A 2.241±0.00 N/A 0.175±0.00 N/A N/A 0.738±0.00 N/A 0.143±0.00 N/A N/A 3.824±0.44 0.273±0.00 1.295±0.00
ENST00000575899 N/A N/A N/A 0.725±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000262294 ENST00000572499 N/A N/A N/A N/A N/A N/A N/A 6.532±0.00 4.214±0.00 N/A N/A N/A N/A N/A
ENSG00000262558 ENST00000571512 N/A 0.098±0.00 0.450±0.00 0.058±0.00 N/A 0.198±0.02 N/A 0.976±0.00 0.509±0.00 N/A N/A 0.089±0.02 N/A 0.185±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020847 ENSMUST00000021208 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.302±0.00 N/A N/A
ENSMUST00000066504 1.043±0.47 5.915±0.31 N/A 0.464±0.06 1.214±0.37 4.686±0.00 N/A N/A 0.339±0.20 N/A N/A 7.106±0.95 0.331±0.18 0.415±0.17
ENSMUST00000108420 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000121287 1.838±1.15 6.134±3.33 1.196±0.02 0.400±0.01 0.764±0.35 3.572±0.69 1.622±0.18 2.141±0.62 0.463±0.24 4.843±0.65 3.292±0.88 7.643±1.67 0.493±0.34 0.504±0.40
ENSMUST00000152035 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.519±0.00 1.344±0.00
ENSMUSG00000053783 ENSMUST00000066408 0.096±0.05 N/A 0.341±0.11 1.273±0.17 0.113±0.07 1.483±0.40 0.483±0.32 0.043±0.00 0.040±0.04 8.481±0.69 N/A 7.877±2.53 0.310±0.27 139.662±45.62
ENSMUSG00000087322 ENSMUST00000135873 N/A 0.561±0.39 0.297±0.09 0.302±0.00 N/A 0.291±0.00 0.166±0.01 N/A 0.136±0.00 0.215±0.00 N/A 0.995±0.41 N/A N/A

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