C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001AS_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000013619-ENSG00000171100 CGP 9606 X:150361422-150673322
GeneTranscriptPositionBiotype
ENSG00000013619 (MAMLD1)
mastermind-like domain containing 1 		ENST00000262858 (MAMLD1-201) 150445454-150514178 protein_coding
ENST00000358892 (MAMLD1-003) 150420999-150469982 protein_coding
ENST00000370401 (MAMLD1-001) 150363284-150514178 protein_coding
ENST00000426613 (MAMLD1-202) 150445454-150514178 protein_coding
ENST00000432680 (MAMLD1-005) 150363419-150513125 protein_coding
ENST00000464149 (MAMLD1-002) 150509325-150514169 retained_intron
ENST00000468306 (MAMLD1-004) 150361422-150470095 processed_transcript
ENSG00000171100 (MTM1)
myotubularin 1 		ENST00000306167 (MTM1-003) 150568634-150672874 processed_transcript
ENST00000370393 (MTM1-001) 150568625-150596993 processed_transcript
ENST00000370396 (MTM1-002) 150568619-150673322 protein_coding
ENST00000424519 (MTM1-005) 150568622-150639021 protein_coding
ENST00000490530 (MTM1-004) 150568639-150645871 processed_transcript
CIL_0001AS_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000059401-ENSMUSG00000031337 CGP 10090 X:71050256-71315691
GeneTranscriptPositionBiotype
ENSMUSG00000031337 (Mtm1)
X-linked myotubular myopathy gene 1 		ENSMUST00000025391 (Mtm1-201) 71215006-71315295 protein_coding
ENSMUST00000033700 (Mtm1-001) 71215039-71315265 protein_coding
ENSMUST00000061970 (Mtm1-202) 71215006-71315295 protein_coding
ENSMUST00000101501 (Mtm1-004) 71215006-71260810 protein_coding
ENSMUST00000114617 (Mtm1-002) 71215082-71315265 protein_coding
ENSMUST00000114621 (Mtm1-003) 71215028-71315288 protein_coding
ENSMUST00000126208 (Mtm1-010) 71215036-71297580 retained_intron
ENSMUST00000129722 (Mtm1-009) 71301369-71315691 retained_intron
ENSMUST00000134859 (Mtm1-007) 71215031-71298861 retained_intron
ENSMUST00000151415 (Mtm1-005) 71215085-71236686 retained_intron
ENSMUST00000152810 (Mtm1-006) 71215085-71256301 retained_intron
ENSMUST00000156452 (Mtm1-008) 71215059-71310311 retained_intron
ENSMUST00000171933 (Mtm1-203) 71210767-71315295 protein_coding
ENSMUSG00000059401 (Mamld1)
mastermind-like domain containing 1 		ENSMUST00000082088 (Mamld1-001) 71050256-71156056 protein_coding
ENSMUST00000114629 (Mamld1-201) 71050256-71154717 protein_coding
ENSMUSG00000077309 (n-R5s8)
nuclear encoded rRNA 5S 8 		ENSMUST00000104121 (n-R5s8-201) 71131237-71131354 rRNA
ENSMUSG00000082262 (Gm14730)
predicted gene 14730 		ENSMUST00000122378 (Gm14730-001) 71197127-71198171 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001AS_0001ENSG00000013619ENST00000262858ENST00000358892ENST00000370401ENST00000426613ENST00000432680ENST00000464149ENST00000468306ENSG00000171100ENST00000306167ENST00000370393ENST00000370396ENST00000424519ENST00000490530CIL_0001AS_0002ENSMUSG00000031337ENSMUST00000025391ENSMUST00000033700ENSMUST00000061970ENSMUST00000101501ENSMUST00000114617ENSMUST00000114621ENSMUST00000126208ENSMUST00000129722ENSMUST00000134859ENSMUST00000151415ENSMUST00000152810ENSMUST00000156452ENSMUST00000171933ENSMUSG00000059401ENSMUST00000082088ENSMUST00000114629ENSMUSG00000077309ENSMUST00000104121ENSMUSG00000082262ENSMUST00000122378
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001AS_0001ENSG00000013619ENST00000262858ENST00000358892ENST00000370401ENST00000426613ENST00000432680ENST00000464149ENSG00000171100ENST00000306167ENST00000370396ENST00000490530CIL_0001AS_0002ENSMUSG00000031337ENSMUST00000025391ENSMUST00000033700ENSMUST00000061970ENSMUST00000114617ENSMUST00000114621ENSMUST00000129722ENSMUST00000134859ENSMUST00000156452ENSMUST00000171933ENSMUSG00000059401ENSMUST00000082088ENSMUST00000114629ENSMUSG00000077309ENSMUST00000104121ENSMUSG00000082262ENSMUST00000122378
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000013619 ENST00000262858 0.513±0.00 N/A N/A 1.856±0.00 0.409±0.00 0.657±0.00 0.185±0.00 0.563±0.00 N/A N/A 1.098±0.00 4.182±2.92 0.505±0.39 1.240±0.00
ENST00000358892 N/A N/A N/A N/A N/A N/A 0.201±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000370401 0.519±0.00 N/A N/A N/A N/A 0.476±0.46 N/A N/A N/A 1.098±0.54 N/A 1.067±0.85 0.494±0.00 0.833±0.00
ENST00000426613 0.526±0.00 1.005±0.00 N/A 0.304±0.00 0.774±0.00 N/A 0.180±0.00 N/A 0.154±0.00 N/A 0.186±0.00 2.111±1.58 N/A 1.134±0.00
ENST00000432680 N/A N/A 0.078±0.00 N/A N/A N/A 0.166±0.00 0.714±0.00 N/A N/A 0.092±0.00 0.128±0.00 N/A N/A
ENST00000464149 0.560±0.00 0.414±0.00 0.530±0.00 0.893±0.00 0.213±0.00 0.334±0.00 0.089±0.04 0.339±0.13 0.366±0.00 1.053±0.00 0.050±0.00 1.711±1.19 0.432±0.00 2.096±0.00
ENST00000468306 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000171100 ENST00000306167 1.207±0.00 1.156±0.00 N/A 1.527±0.00 0.901±0.00 0.602±0.00 1.777±0.00 0.727±0.00 0.919±0.00 0.893±0.00 1.728±0.00 1.546±0.24 0.480±0.01 1.050±0.00
ENST00000370393 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000370396 1.916±0.00 0.458±0.00 0.272±0.00 1.193±0.03 N/A N/A 0.167±0.00 0.535±0.00 N/A 0.867±0.00 0.490±0.07 1.808±0.62 1.077±0.32 2.613±1.11
ENST00000424519 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490530 N/A N/A 1.759±0.00 2.514±0.00 N/A N/A 1.350±0.00 N/A N/A 1.716±0.00 1.705±0.00 1.071±0.00 N/A 3.097±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031337 ENSMUST00000025391 N/A 0.748±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000033700 2.078±0.52 3.159±1.18 3.971±0.51 0.816±0.37 2.521±0.47 6.849±2.27 3.758±0.31 1.941±0.57 2.345±0.64 3.778±0.84 3.251±0.28 1.362±0.64 2.178±1.60 1.224±0.39
ENSMUST00000061970 0.551±0.00 0.735±0.00 N/A 0.277±0.00 1.766±0.00 N/A N/A 0.488±0.05 N/A N/A 0.916±0.00 N/A 1.025±0.00 0.672±0.00
ENSMUST00000101501 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000114617 N/A N/A N/A N/A N/A 3.196±1.25 0.740±0.00 N/A 0.676±0.00 1.145±0.00 N/A 0.457±0.19 N/A N/A
ENSMUST00000114621 N/A 1.107±0.00 N/A N/A 1.080±0.00 4.845±1.99 N/A 1.143±0.44 1.270±0.00 N/A N/A 0.837±0.44 N/A N/A
ENSMUST00000126208 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129722 0.410±0.08 0.573±0.15 N/A N/A 0.648±0.05 N/A N/A N/A 0.190±0.00 0.779±0.13 N/A 0.670±0.38 N/A 0.418±0.00
ENSMUST00000134859 N/A N/A N/A 0.205±0.07 N/A N/A N/A N/A N/A N/A N/A 0.324±0.11 N/A N/A
ENSMUST00000151415 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152810 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156452 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.204±0.00 N/A N/A
ENSMUST00000171933 N/A 0.909±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.697±0.00 N/A 1.007±0.00
ENSMUSG00000059401 ENSMUST00000082088 0.858±0.43 2.718±0.71 0.598±0.34 1.945±0.09 0.450±0.19 0.521±0.19 1.046±0.43 0.325±0.12 0.092±0.06 1.224±0.23 0.207±0.07 4.018±1.33 0.425±0.11 0.742±0.34
ENSMUST00000114629 0.324±0.12 1.182±0.10 0.348±0.00 1.928±1.05 0.388±0.09 0.189±0.07 0.326±0.00 0.187±0.02 0.078±0.02 0.501±0.00 0.189±0.06 3.546±1.61 0.241±0.13 0.377±0.11
ENSMUSG00000077309 ENSMUST00000104121 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.944±0.00 N/A N/A
ENSMUSG00000082262 ENSMUST00000122378 0.067±0.01 N/A 0.026±0.00 0.061±0.05 N/A N/A N/A N/A 0.030±0.02 N/A 0.048±0.00 0.148±0.10 0.119±0.14 0.158±0.06

Loading