C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: myotubularin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000306167 MTM1-003 ENSG00000171100 9606 + X:150568634-150672874 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000306167
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000306167 1.207±0.00 1.156±0.00 1.527±0.00 0.901±0.00 0.602±0.00 1.777±0.00 0.727±0.00 0.919±0.00 0.893±0.00 1.728±0.00 1.546±0.24 0.480±0.01 1.050±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001AS CIL_0001AS_0001 CGP X:150361422-150673322
CIL_0000PJ CIL_0000PJ_0002 CGP X:150568619-150765103

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000061970 Mtm1-202 protein_coding Mus_musculus 0 1988
ENSMUST00000171933 Mtm1-203 protein_coding Mus_musculus 0 1988
ENSMUST00000033700 Mtm1-001 protein_coding Mus_musculus 0 1988
ENSMUST00000114617 Mtm1-002 protein_coding Mus_musculus 0 1988
ENSMUST00000156452 Mtm1-008 retained_intron Mus_musculus 0 1533
ENSMUST00000025391 Mtm1-201 protein_coding Mus_musculus 0 1062
ENSMUST00000114621 Mtm1-003 protein_coding Mus_musculus 0 1062
ENSMUST00000126208 Mtm1-010 retained_intron Mus_musculus 0 819
ENSMUST00000129722 Mtm1-009 retained_intron Mus_musculus 0 813
ENSMUST00000134859 Mtm1-007 retained_intron Mus_musculus 0 784
ENSMUST00000101501 Mtm1-004 protein_coding Mus_musculus 0 300
ENSMUST00000152810 Mtm1-006 retained_intron Mus_musculus 0 276
ENSMUST00000151415 Mtm1-005 retained_intron Mus_musculus 0 276

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