C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: X-linked myotubular myopathy gene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000033700 Mtm1-001 ENSMUSG00000031337 10090 + X:71215039-71315265 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000033700
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000033700 2.078±0.52 3.159±1.18 3.971±0.51 0.816±0.37 2.521±0.47 6.849±2.27 3.758±0.31 1.941±0.57 2.345±0.64 3.778±0.84 3.251±0.28 1.362±0.64 2.178±1.60 1.224±0.39

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001AS CIL_0001AS_0002 CGP X:71050256-71315691
CIL_0000PJ CIL_0000PJ_0003 CGP X:71210767-71419196

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001726 ISS ruffle
GO:0004438 ISS phosphatidylinositol-3-phosphatase activity
GO:0004721 ISS phosphoprotein phosphatase activity
GO:0004725 IEA protein tyrosine phosphatase activity
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0005770 ISS late endosome
GO:0005886 ISS plasma membrane
GO:0006470 ISS protein dephosphorylation
GO:0008333 ISS endosome to lysosome transport
GO:0015031 IEA protein transport
GO:0019215 ISS intermediate filament binding
GO:0030175 ISS filopodium
GO:0031674 IDA I band
GO:0035091 ISS phosphatidylinositol binding
GO:0035335 IEA peptidyl-tyrosine dephosphorylation
GO:0044088 ISS regulation of vacuole organization
GO:0045109 ISS intermediate filament organization
GO:0046716 IMP muscle cell cellular homeostasis
GO:0046856 ISS phosphatidylinositol dephosphorylation
GO:0048311 IMP mitochondrion distribution
GO:0052629 ISS phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity
GO:0070584 IMP mitochondrion morphogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000306167 MTM1-003 processed_transcript Homo_sapiens 0 1988
ENST00000370396 MTM1-002 protein_coding Homo_sapiens 0 2590
ENST00000424519 MTM1-005 protein_coding Homo_sapiens 0 337
ENST00000490530 MTM1-004 processed_transcript Homo_sapiens 0 784

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