C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001BK_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000068288-ENSDARG00000004580 CGP 7955 2:35714224-35761653
GeneTranscriptPositionBiotype
ENSDARG00000004580 (nmnat2)
nicotinamide nucleotide adenylyltransferase 2 		ENSDART00000003550 (nmnat2-001) 35747016-35761653 protein_coding
ENSDARG00000068288 (LAMC2)
laminin, gamma 2 		ENSDART00000098706 (LAMC2-201) 35714224-35742453 protein_coding
CIL_0001BK_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000058085-ENSG00000157064 CGP 9606 1:183186238-183418602
GeneTranscriptPositionBiotype
ENSG00000058085 (LAMC2)
laminin, gamma 2 		ENST00000264144 (LAMC2-001) 183186288-183244900 protein_coding
ENST00000461729 (LAMC2-002) 183239501-183240379 processed_transcript
ENST00000476255 (LAMC2-004) 183243434-183243906 processed_transcript
ENST00000493293 (LAMC2-003) 183186238-183241261 protein_coding
ENSG00000157064 (NMNAT2)
nicotinamide nucleotide adenylyltransferase 2 		ENST00000287713 (NMNAT2-001) 183248237-183418602 protein_coding
ENST00000294868 (NMNAT2-002) 183248237-183304874 protein_coding
ENST00000464047 (NMNAT2-004) 183252424-183278685 processed_transcript
ENST00000473046 (NMNAT2-003) 183282866-183290743 processed_transcript
ENSG00000233562 (RP11-548N1.1)
 ENST00000454879 (RP11-548N1.1-001) 183266602-183267285 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001BK_0001ENSDARG00000004580ENSDART00000003550ENSDARG00000068288ENSDART00000098706CIL_0001BK_0002ENSG00000058085ENST00000264144ENST00000461729ENST00000476255ENST00000493293ENSG00000157064ENST00000287713ENST00000294868ENST00000464047ENST00000473046ENSG00000233562ENST00000454879
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001BK_0001ENSDARG00000004580ENSDART00000003550ENSDARG00000068288ENSDART00000098706CIL_0001BK_0002ENSG00000058085ENST00000264144ENST00000476255ENST00000493293ENSG00000157064ENST00000287713ENST00000294868ENST00000464047ENSG00000233562ENST00000454879
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000004580 ENSDART00000003550 N/A N/A N/A 61.903±33.61 N/A N/A 0.126±0.09 0.375±0.00 0.080±0.00 N/A 5.114±0.00 N/A N/A N/A
ENSDARG00000068288 ENSDART00000098706 N/A N/A N/A 0.112±0.00 N/A N/A 1.346±1.27 4.279±2.25 N/A N/A 4.285±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000058085 ENST00000264144 1.662±0.00 1.255±0.00 0.452±0.00 0.093±0.04 4.712±2.06 1.458±0.37 0.214±0.09 2.443±2.43 0.068±0.00 7.620±5.32 0.307±0.00 10.563±10.04 10.751±1.13 0.883±0.01
ENST00000461729 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476255 N/A N/A N/A N/A N/A N/A N/A N/A 0.302±0.00 N/A N/A N/A N/A N/A
ENST00000493293 N/A N/A N/A 0.098±0.00 1.419±0.00 N/A 0.168±0.00 0.015±0.00 0.079±0.00 N/A N/A 3.234±2.40 N/A 0.402±0.00
ENSG00000157064 ENST00000287713 1.701±0.00 0.229±0.00 N/A 13.680±0.47 0.604±0.00 0.677±0.00 0.509±0.00 0.120±0.00 N/A N/A N/A 0.303±0.19 0.278±0.00 0.952±0.00
ENST00000294868 2.583±0.00 N/A N/A N/A 0.606±0.00 0.116±0.00 0.194±0.00 0.016±0.00 0.011±0.00 N/A 0.200±0.16 0.253±0.00 0.350±0.02 1.900±0.00
ENST00000464047 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.506±0.00 N/A N/A N/A 24.148±10.13
ENST00000473046 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000233562 ENST00000454879 N/A 0.020±0.00 N/A 0.163±0.00 N/A N/A N/A N/A 0.018±0.00 N/A N/A N/A N/A N/A

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