C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001BL_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000023053-ENSDARG00000010381 CGP 7955 2:22753059-22819674
GeneTranscriptPositionBiotype
ENSDARG00000010381 (rnf2)
ring finger protein 2 		ENSDART00000017034 (rnf2-201) 22809088-22819674 protein_coding
ENSDART00000154645 (rnf2-002) 22809177-22813349 protein_coding
ENSDARG00000023053 (fam129ab)
family with sequence similarity 129, member Ab 		ENSDART00000099690 (fam129ab-001) 22753059-22806760 protein_coding
CIL_0001BL_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000135842-ENSG00000121481 CGP 9606 1:184790724-185102608
GeneTranscriptPositionBiotype
ENSG00000121481 (RNF2)
ring finger protein 2 		ENST00000367509 (RNF2-002) 185045526-185101057 protein_coding
ENST00000367510 (RNF2-001) 185045364-185102608 protein_coding
ENST00000453650 (RNF2-003) 185046096-185098344 protein_coding
ENST00000498201 (RNF2-004) 185045536-185092006 retained_intron
ENSG00000135842 (FAM129A)
family with sequence similarity 129, member A 		ENST00000367511 (FAM129A-001) 184791030-184974550 protein_coding
ENST00000417056 (FAM129A-002) 184790724-184805985 protein_coding
ENST00000461167 (FAM129A-004) 184823650-184868558 processed_transcript
ENST00000487074 (FAM129A-003) 184794118-184868041 processed_transcript
ENST00000496299 (FAM129A-005) 184887739-184890185 processed_transcript
ENSG00000232792 (FTH1P25)
ferritin, heavy polypeptide 1 pseudogene 25 		ENST00000447665 (FTH1P25-001) 185071567-185072035 processed_pseudogene
ENSG00000252222 (RNU7-13P)
RNA, U7 small nuclear 13 pseudogene 		ENST00000516413 (RNU7-13P-201) 184821428-184821489 snRNA
ENSG00000260976 (GS1-120K12.4)
 ENST00000566476 (GS1-120K12.4-001) 185001527-185008683 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001BL_0001ENSDARG00000010381ENSDART00000017034ENSDART00000154645ENSDARG00000023053ENSDART00000099690CIL_0001BL_0002ENSG00000121481ENST00000367509ENST00000367510ENST00000453650ENST00000498201ENSG00000135842ENST00000367511ENST00000417056ENST00000461167ENST00000487074ENST00000496299ENSG00000232792ENST00000447665ENSG00000252222ENST00000516413ENSG00000260976ENST00000566476
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001BL_0001ENSDARG00000010381ENSDART00000017034ENSDARG00000023053ENSDART00000099690CIL_0001BL_0002ENSG00000121481ENST00000367509ENST00000367510ENST00000453650ENSG00000135842ENST00000367511ENST00000487074ENSG00000232792ENST00000447665ENSG00000252222ENST00000516413ENSG00000260976ENST00000566476
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000010381 ENSDART00000017034 N/A N/A N/A 27.999±7.25 N/A N/A 22.792±2.16 28.996±1.46 3.615±0.00 N/A 11.946±0.00 N/A N/A N/A
ENSDART00000154645 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000023053 ENSDART00000099690 N/A N/A N/A 0.275±0.17 N/A N/A 1.137±0.47 2.276±0.51 0.026±0.00 N/A 0.597±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000121481 ENST00000367509 1.832±0.00 N/A 1.264±0.00 N/A N/A 1.875±0.00 0.852±0.00 0.930±0.00 0.828±0.34 1.692±0.00 0.842±0.01 N/A 2.534±0.23 4.778±0.00
ENST00000367510 0.890±0.00 N/A N/A 2.396±0.02 1.365±0.49 1.531±0.83 1.359±0.00 0.353±0.00 1.104±0.45 2.441±0.00 1.728±0.00 2.356±1.16 1.945±0.49 2.357±0.51
ENST00000453650 3.502±0.00 N/A 1.284±0.00 N/A N/A 1.166±0.00 0.412±0.00 1.146±0.00 N/A N/A 0.615±0.00 12.155±0.00 7.300±5.54 20.913±0.00
ENST00000498201 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000135842 ENST00000367511 12.240±0.00 12.206±0.00 1.008±0.00 1.075±0.61 9.415±0.15 27.333±17.14 54.693±17.12 2.026±1.39 43.729±43.26 9.854±0.86 22.897±15.05 2.867±1.69 3.311±0.46 6.687±5.85
ENST00000417056 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000461167 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487074 N/A N/A N/A 0.209±0.00 N/A N/A N/A 0.803±0.00 N/A N/A N/A 0.647±0.00 N/A N/A
ENST00000496299 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000232792 ENST00000447665 N/A 0.026±0.00 0.130±0.00 N/A N/A N/A N/A 0.434±0.33 N/A 1.042±0.00 N/A 0.047±0.00 N/A 0.096±0.00
ENSG00000252222 ENST00000516413 N/A N/A N/A N/A N/A N/A N/A 1.665±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000260976 ENST00000566476 N/A 0.019±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.072±0.00 0.077±0.00 0.025±0.00

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