C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ring finger protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000017034 rnf2-201 ENSDARG00000010381 7955 + 2:22809088-22819674 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000017034
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000017034 27.999±7.25 22.792±2.16 28.996±1.46 3.615±0.00 11.946±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001BL CIL_0001BL_0001 CGP 2:22753059-22819674

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000278 ISS mitotic cell cycle
GO:0003682 ISS chromatin binding
GO:0005515 IEA protein binding
GO:0005634 ISS nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0008270 IEA zinc ion binding
GO:0009948 ISS anterior/posterior axis specification
GO:0016567 IEA protein ubiquitination
GO:0016604 ISS nuclear body
GO:0016874 IEA ligase activity
GO:0033339 IMP pectoral fin development
GO:0035102 ISS PRC1 complex
GO:0046872 IEA metal ion binding
GO:0060042 IGI retina morphogenesis in camera-type eye
GO:0071339 ISS MLL1 complex
GO:1902254 IMP negative regulation of intrinsic apoptotic signaling pathway by p53 class mediator

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000025183 Ring1-001 protein_coding Mus_musculus 0 255
ENSMUST00000174054 Ring1-002 retained_intron Mus_musculus 0 243

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