C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0001BP_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000004539-ENSDARG00000024546 CGP 7955 2:20712497-20753362
GeneTranscriptPositionBiotype
ENSDARG00000004539 (ptgs2a)
prostaglandin-endoperoxide synthase 2a
ENSDART00000006870 (ptgs2a-001) 20712497-20719864 protein_coding
ENSDART00000150051 (ptgs2a-002) 20715171-20716335 retained_intron
ENSDARG00000024546 (cpla2)
cytosolic phospholipase a2
ENSDART00000099913 (cpla2-001) 20721899-20753362 protein_coding
CIL_0001BP_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000010276-ENSDARG00000017141 CGP 7955 20:34146426-34169517
GeneTranscriptPositionBiotype
ENSDARG00000010276 (ptgs2b)
prostaglandin-endoperoxide synthase 2b
ENSDART00000010028 (ptgs2b-001) 34146426-34152023 protein_coding
ENSDARG00000017141 (pla2g4a)
phospholipase A2, group IVA (cytosolic, calcium-dependent)
ENSDART00000023211 (pla2g4a-201) 34154409-34168958 protein_coding
ENSDART00000135915 (pla2g4a-001) 34155322-34169517 protein_coding
ENSDARG00000096789 (si:ch211-169j21.4)
si:ch211-169j21.4
ENSDART00000152963 (si:ch211-169j21.4-001) 34158522-34172204 antisense
CIL_0001BP_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000073756-ENSG00000116711 CGP 9606 1:186671791-186988981
GeneTranscriptPositionBiotype
ENSG00000073756 (PTGS2)
prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)
ENST00000367468 (PTGS2-001) 186671791-186680427 protein_coding
ENST00000466691 (PTGS2-003) 186674496-186675869 processed_transcript
ENST00000490885 (PTGS2-002) 186672893-186680423 processed_transcript
ENST00000559627 (PTGS2-004) 186674353-186680290 nonsense_mediated_decay
ENST00000559800 (PTGS2-005) 186678270-186680423 processed_transcript
ENSG00000116711 (PLA2G4A)
phospholipase A2, group IVA (cytosolic, calcium-dependent)
ENST00000367466 (PLA2G4A-001) 186828953-186988981 protein_coding
ENST00000466600 (PLA2G4A-002) 186854286-186939230 processed_transcript
ENSG00000273129 (PACERR)
PTGS2 antisense NFKB1 complex-mediated expression regulator RNA
ENST00000608917 (PACERR-001) 186680622-186681446 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001BP_0001ENSDARG00000004539ENSDART00000006870ENSDART00000150051ENSDARG00000024546ENSDART00000099913CIL_0001BP_0002ENSDARG00000010276ENSDART00000010028ENSDARG00000017141ENSDART00000023211ENSDART00000135915ENSDARG00000096789ENSDART00000152963CIL_0001BP_0003ENSG00000073756ENST00000367468ENST00000466691ENST00000490885ENST00000559627ENST00000559800ENSG00000116711ENST00000367466ENST00000466600ENSG00000273129ENST00000608917
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001BP_0001ENSDARG00000004539ENSDART00000006870ENSDARG00000024546ENSDART00000099913CIL_0001BP_0002ENSDARG00000010276ENSDART00000010028ENSDARG00000017141ENSDART00000023211ENSDART00000135915ENSDARG00000096789ENSDART00000152963CIL_0001BP_0003ENSG00000073756ENST00000367468ENST00000490885ENST00000559627ENSG00000116711ENST00000367466ENST00000466600ENSG00000273129ENST00000608917
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000004539 ENSDART00000006870 N/A N/A N/A 0.662±0.55 N/A N/A 2.253±0.82 1.356±0.00 N/A N/A 1.344±0.00 N/A N/A N/A
ENSDART00000150051 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000024546 ENSDART00000099913 N/A N/A N/A 0.400±0.17 N/A N/A 2.199±0.00 0.222±0.11 0.098±0.00 N/A 0.779±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000010276 ENSDART00000010028 N/A N/A N/A 0.332±0.23 N/A N/A 1.993±0.05 0.795±0.71 0.020±0.00 N/A 1.021±0.00 N/A N/A N/A
ENSDARG00000017141 ENSDART00000023211 N/A N/A N/A 0.068±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000135915 N/A N/A N/A 0.177±0.11 N/A N/A 4.583±0.00 2.337±1.51 N/A N/A 0.109±0.00 N/A N/A N/A
ENSDARG00000096789 ENSDART00000152963 N/A N/A N/A 0.121±0.01 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000073756 ENST00000367468 0.157±0.00 N/A N/A 0.760±0.28 0.524±0.00 3.571±0.00 0.103±0.02 0.151±0.05 1.116±1.04 27.460±0.00 0.118±0.00 0.737±0.84 2.270±1.55 0.314±0.24
ENST00000466691 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490885 N/A N/A 0.328±0.00 N/A N/A N/A 0.043±0.00 N/A N/A 1.952±0.00 0.047±0.00 N/A N/A N/A
ENST00000559627 0.432±0.00 N/A 2.428±0.00 1.613±0.69 3.834±0.00 2.180±0.00 0.091±0.00 0.045±0.00 4.789±4.73 10.136±0.00 N/A 1.045±0.78 0.589±0.34 N/A
ENST00000559800 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000116711 ENST00000367466 0.706±0.00 3.835±0.00 0.309±0.00 0.872±0.52 5.170±4.79 2.506±2.24 0.550±0.09 4.749±0.00 0.838±0.52 2.935±1.91 0.589±0.00 1.961±0.09 1.295±0.29 2.757±1.84
ENST00000466600 N/A N/A 1.391±0.00 N/A N/A N/A N/A 0.162±0.00 N/A N/A N/A N/A 0.408±0.00 N/A
ENSG00000273129 ENST00000608917 N/A 0.019±0.00 0.203±0.00 0.063±0.00 0.019±0.00 0.176±0.00 0.019±0.00 N/A 0.312±0.00 0.342±0.00 N/A 0.081±0.06 N/A 0.158±0.10

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