C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000559627 PTGS2-004 ENSG00000073756 9606 - 1:186674353-186680290 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaENST00000559627
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta
ENST00000559627 0.432±0.00 2.428±0.00 1.613±0.69 3.834±0.00 2.180±0.00 0.091±0.00 0.045±0.00 4.789±4.73 10.136±0.00 1.045±0.78 0.589±0.34

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001BQ CIL_0001BQ_0003 CGP 1:186443566-186680427
CIL_0001BP CIL_0001BP_0003 CGP 1:186671791-186988981

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004601 IEA peroxidase activity
GO:0004666 IEA prostaglandin-endoperoxide synthase activity
GO:0005515 IEA protein binding
GO:0006954 IEA inflammatory response
GO:0006979 IEA response to oxidative stress
GO:0008217 IEA regulation of blood pressure
GO:0019371 IEA cyclooxygenase pathway
GO:0020037 IEA heme binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000035065 Ptgs2-001 protein_coding Mus_musculus 0 1271

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