C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001D4_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000031100-ENSDARG00000094010 CGP 7955 20:34345243-34412939
GeneTranscriptPositionBiotype
ENSDARG00000031100 (ivns1abpa)
influenza virus NS1A binding protein a 		ENSDART00000061659 (ivns1abpa-001) 34351482-34365791 protein_coding
ENSDART00000135889 (ivns1abpa-003) 34362933-34364190 retained_intron
ENSDART00000144922 (ivns1abpa-005) 34358749-34362358 retained_intron
ENSDART00000153207 (ivns1abpa-004) 34345243-34357714 protein_coding
ENSDARG00000079036 (si:dkeyp-11g8.3)
si:dkeyp-11g8.3 		ENSDART00000144090 (si:dkeyp-11g8.3-001) 34399343-34404264 protein_coding
ENSDARG00000094010 (swt1)
SWT1 RNA endoribonuclease homolog (S. cerevisiae) 		ENSDART00000133593 (swt1-001) 34368257-34412932 protein_coding
ENSDART00000136591 (swt1-002) 34407804-34412939 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0001D4_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000023150-ENSMUSG00000052748 CGP 10090 1:151344477-151428455
GeneTranscriptPositionBiotype
ENSMUSG00000023150 (Ivns1abp)
influenza virus NS1A binding protein 		ENSMUST00000023918 (Ivns1abp-001) 151344477-151364422 protein_coding
ENSMUST00000097543 (Ivns1abp-002) 151344518-151364415 protein_coding
ENSMUST00000111887 (Ivns1abp-003) 151344509-151356799 protein_coding
ENSMUST00000186745 (Ivns1abp-004) 151344578-151363365 nonsense_mediated_decay
ENSMUST00000190872 (Ivns1abp-005) 151361247-151362034 protein_coding
ENSMUSG00000052748 (Swt1)
SWT1 RNA endoribonuclease homolog (S. cerevisiae) 		ENSMUST00000064771 (Swt1-001) 151367699-151428455 protein_coding
ENSMUST00000111883 (Swt1-003) 151368364-151428436 nonsense_mediated_decay
ENSMUST00000124880 (Swt1-008) 151370384-151372364 retained_intron
ENSMUST00000129939 (Swt1-005) 151401123-151423555 protein_coding
ENSMUST00000131312 (Swt1-002) 151416319-151423344 retained_intron
ENSMUST00000138095 (Swt1-004) 151411158-151412979 retained_intron
ENSMUST00000139244 (Swt1-007) 151379392-151384516 retained_intron
ENSMUST00000141977 (Swt1-006) 151391436-151403027 protein_coding
ENSMUST00000185247 (Swt1-010) 151427024-151428455 retained_intron
ENSMUST00000189595 (Swt1-009) 151401758-151404607 retained_intron

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001D4_0001ENSDARG00000031100ENSDART00000061659ENSDART00000135889ENSDART00000144922ENSDART00000153207ENSDARG00000079036ENSDART00000144090ENSDARG00000094010ENSDART00000133593ENSDART00000136591CIL_0001D4_0002ENSMUSG00000023150ENSMUST00000023918ENSMUST00000097543ENSMUST00000111887ENSMUST00000186745ENSMUST00000190872ENSMUSG00000052748ENSMUST00000064771ENSMUST00000111883ENSMUST00000124880ENSMUST00000129939ENSMUST00000131312ENSMUST00000138095ENSMUST00000139244ENSMUST00000141977ENSMUST00000185247ENSMUST00000189595
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001D4_0001ENSDARG00000031100ENSDART00000061659ENSDARG00000079036ENSDART00000144090ENSDARG00000094010ENSDART00000133593ENSDART00000136591CIL_0001D4_0002ENSMUSG00000023150ENSMUST00000023918ENSMUST00000097543ENSMUST00000111887ENSMUST00000186745ENSMUST00000190872ENSMUSG00000052748ENSMUST00000064771ENSMUST00000111883ENSMUST00000129939ENSMUST00000131312ENSMUST00000138095ENSMUST00000189595
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000031100 ENSDART00000061659 N/A N/A N/A 58.966±19.90 N/A N/A 20.060±10.43 34.163±7.04 6.421±0.00 N/A 16.271±0.00 N/A N/A N/A
ENSDART00000135889 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000144922 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000153207 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000079036 ENSDART00000144090 N/A N/A N/A 0.168±0.12 N/A N/A 0.204±0.13 0.010±0.00 N/A N/A 0.071±0.00 N/A N/A N/A
ENSDARG00000094010 ENSDART00000133593 N/A N/A N/A 1.281±0.60 N/A N/A 2.516±0.81 2.460±1.34 N/A N/A N/A N/A N/A N/A
ENSDART00000136591 N/A N/A N/A 3.015±0.84 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000023150 ENSMUST00000023918 18.003±1.06 N/A 24.602±4.68 47.100±27.21 10.342±2.59 25.648±6.62 101.392±20.15 64.728±6.10 25.993±19.79 20.156±2.91 40.971±2.01 47.497±36.08 18.867±8.32 18.070±6.67
ENSMUST00000097543 N/A 19.120±6.62 N/A N/A 11.644±0.00 19.508±7.99 N/A N/A 2.857±0.41 12.040±0.00 N/A 27.266±0.00 N/A N/A
ENSMUST00000111887 N/A 38.580±17.12 N/A N/A 9.733±0.63 16.272±5.67 N/A N/A 2.901±0.00 N/A N/A 37.848±8.00 N/A N/A
ENSMUST00000186745 N/A N/A 6.177±2.19 22.328±9.71 14.655±2.50 23.867±0.00 52.135±6.18 19.395±0.00 15.607±12.97 N/A N/A 40.524±18.33 7.245±0.89 17.394±0.00
ENSMUST00000190872 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 34.948±0.00 N/A
ENSMUSG00000052748 ENSMUST00000064771 1.264±0.59 0.644±0.00 4.134±1.13 2.736±1.32 1.683±0.61 1.212±0.13 0.725±0.32 2.132±0.76 3.617±2.58 4.256±1.46 0.757±0.19 2.429±0.95 9.959±4.59 4.955±1.52
ENSMUST00000111883 N/A 1.333±0.42 N/A N/A N/A N/A 0.500±0.00 N/A 0.553±0.00 N/A N/A 0.669±0.00 N/A 3.019±0.19
ENSMUST00000124880 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129939 N/A N/A N/A N/A N/A N/A 1.147±0.00 N/A N/A N/A N/A 4.909±1.56 N/A 5.922±0.00
ENSMUST00000131312 N/A 0.284±0.01 N/A N/A N/A 0.498±0.00 N/A 0.383±0.00 N/A N/A N/A 0.565±0.13 N/A N/A
ENSMUST00000138095 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 23.979±6.65 N/A
ENSMUST00000139244 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141977 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000185247 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000189595 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.040±0.00 N/A N/A

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