C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: influenza virus NS1A binding protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000186745 Ivns1abp-004 ENSMUSG00000023150 10090 + 1:151344578-151363365 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverOvaryPlacentaTestisENSMUST00000186745
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Ovary Placenta Testis
ENSMUST00000186745 6.177±2.19 22.328±9.71 14.655±2.50 23.867±0.00 52.135±6.18 19.395±0.00 15.607±12.97 40.524±18.33 7.245±0.89 17.394±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00065A CIL_00065A_0002 CGP 1:150562524-151364422
CIL_0001D4 CIL_0001D4_0002 CGP 1:151344477-151428455

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005856 IEA cytoskeleton
GO:2001243 IMP negative regulation of intrinsic apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000367497 IVNS1ABP-006 protein_coding Homo_sapiens 0 523
ENST00000367498 IVNS1ABP-001 protein_coding Homo_sapiens 0 1905
ENST00000422754 IVNS1ABP-007 protein_coding Homo_sapiens 0 466
ENST00000459929 IVNS1ABP-002 processed_transcript Homo_sapiens 0 1903
ENST00000468217 IVNS1ABP-008 retained_intron Homo_sapiens 0 407
ENST00000475046 IVNS1ABP-004 retained_intron Homo_sapiens 0 1500
ENST00000480769 IVNS1ABP-003 retained_intron Homo_sapiens 0 2331
ENST00000491112 IVNS1ABP-009 retained_intron Homo_sapiens 0 499
ENST00000494880 IVNS1ABP-005 processed_transcript Homo_sapiens 0 1110

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