C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001EA_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000128519-ENSG00000081800 CGP 9606 7:122994704-123199986
GeneTranscriptPositionBiotype
ENSG00000081800 (SLC13A1)
solute carrier family 13 (sodium/sulfate symporter), member 1 		ENST00000194130 (SLC13A1-001) 123113531-123199986 protein_coding
ENST00000427975 (SLC13A1-003) 123114525-123199972 nonsense_mediated_decay
ENST00000439260 (SLC13A1-002) 123115375-123199971 nonsense_mediated_decay
ENST00000539873 (SLC13A1-201) 123115375-123181146 protein_coding
ENSG00000128519 (TAS2R16)
taste receptor, type 2, member 16 		ENST00000249284 (TAS2R16-001) 122994704-122995700 protein_coding
CIL_0001EA_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000043865-ENSMUSG00000029700 CGP 10090 6:23969161-24168092
GeneTranscriptPositionBiotype
ENSMUSG00000029700 (Slc13a1)
solute carrier family 13 (sodium/sulfate symporters), member 1 		ENSMUST00000031713 (Slc13a1-001) 24088283-24168092 protein_coding
ENSMUST00000174594 (Slc13a1-004) 24088550-24108574 processed_transcript
ENSMUST00000176692 (Slc13a1-003) 24134842-24168090 retained_intron
ENSMUST00000177412 (Slc13a1-002) 24105292-24108571 retained_intron
ENSMUSG00000093580 (Gm20706)
predicted gene 20706 		ENSMUST00000175985 (Gm20706-001) 24138341-24140363 processed_pseudogene
ENSMUSG00000096522 (Gm26386)
predicted gene, 26386 		ENSMUST00000178407 (Gm26386-201) 24143368-24143468 miRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001EA_0001ENSG00000081800ENST00000194130ENST00000427975ENST00000439260ENST00000539873ENSG00000128519ENST00000249284CIL_0001EA_0002ENSMUSG00000029700ENSMUST00000031713ENSMUST00000174594ENSMUST00000176692ENSMUST00000177412ENSMUSG00000093580ENSMUST00000175985ENSMUSG00000096522ENSMUST00000178407
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001EA_0001ENSG00000081800ENST00000194130ENST00000427975ENST00000539873ENSG00000128519ENST00000249284CIL_0001EA_0002ENSMUSG00000029700ENSMUST00000031713ENSMUST00000174594ENSMUST00000176692ENSMUSG00000093580ENSMUST00000175985ENSMUSG00000096522ENSMUST00000178407
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000081800 ENST00000194130 N/A 0.002±0.00 N/A 0.004±0.00 0.011±0.00 0.037±0.01 0.005±0.00 0.740±0.69 0.080±0.08 0.296±0.00 0.008±0.00 0.049±0.03 0.008±0.00 0.014±0.01
ENST00000427975 N/A N/A 5.234±0.00 N/A N/A 0.013±0.00 N/A N/A N/A N/A N/A N/A N/A 0.062±0.00
ENST00000439260 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000539873 N/A N/A N/A 0.001±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000128519 ENST00000249284 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.053±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029700 ENSMUST00000031713 N/A N/A N/A N/A 0.022±0.01 5.370±2.41 N/A 129.600±16.18 N/A N/A N/A 0.113±0.05 N/A N/A
ENSMUST00000174594 N/A N/A N/A N/A N/A N/A N/A N/A 0.088±0.05 0.049±0.00 N/A N/A N/A N/A
ENSMUST00000176692 0.127±0.02 0.131±0.04 0.061±0.01 0.218±0.05 0.114±0.05 N/A 0.039±0.03 N/A 0.055±0.03 0.121±0.03 0.027±0.01 0.185±0.09 0.086±0.07 0.160±0.06
ENSMUST00000177412 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000093580 ENSMUST00000175985 N/A N/A N/A N/A N/A 0.047±0.00 N/A 0.151±0.07 N/A 0.024±0.00 N/A 0.015±0.00 N/A N/A
ENSMUSG00000096522 ENSMUST00000178407 N/A N/A N/A 13.407±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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