C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 13 (sodium/sulfate symporter), member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000194130 SLC13A1-001 ENSG00000081800 9606 - 7:123113531-123199986 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000194130
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000194130 0.002±0.00 0.004±0.00 0.011±0.00 0.037±0.01 0.005±0.00 0.740±0.69 0.080±0.08 0.296±0.00 0.008±0.00 0.049±0.03 0.008±0.00 0.014±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001EA CIL_0001EA_0001 CGP 7:122994704-123199986
CIL_0001E3 CIL_0001E3_0001 CGP 7:123113531-123535077

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0005886 TAS plasma membrane
GO:0006814 IEA sodium ion transport
GO:0008271 IEA secondary active sulfate transmembrane transporter activity
GO:0008272 IEA sulfate transport
GO:0015382 IEA sodium:sulfate symporter activity
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0035725 IEA sodium ion transmembrane transport
GO:0055085 TAS:IEA transmembrane transport
GO:1902358 IEA sulfate transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031713 Slc13a1-001 protein_coding Mus_musculus 0 1727
ENSMUST00000174594 Slc13a1-004 processed_transcript Mus_musculus 0 959

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