C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001ED_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000130177-ENSG00000169062 CGP 9606 13:114234887-114305817
GeneTranscriptPositionBiotype
ENSG00000130177 (CDC16)
cell division cycle 16 		ENST00000252457 (CDC16-006) 114235061-114272675 protein_coding
ENST00000252458 (CDC16-001) 114235081-114272723 protein_coding
ENST00000356221 (CDC16-009) 114234977-114272675 protein_coding
ENST00000360383 (CDC16-201) 114234887-114272675 protein_coding
ENST00000375308 (CDC16-008) 114235061-114272675 protein_coding
ENST00000375310 (CDC16-007) 114234979-114272675 protein_coding
ENST00000461716 (CDC16-004) 114264212-114272485 processed_transcript
ENST00000484907 (CDC16-003) 114244562-114262979 retained_intron
ENST00000494581 (CDC16-005) 114245743-114247237 processed_transcript
ENST00000494766 (CDC16-002) 114235018-114242675 retained_intron
ENSG00000169062 (UPF3A)
UPF3 regulator of nonsense transcripts homolog A (yeast) 		ENST00000351487 (UPF3A-010) 114281628-114305808 protein_coding
ENST00000375299 (UPF3A-001) 114281584-114305817 protein_coding
ENST00000474056 (UPF3A-007) 114281925-114301792 processed_transcript
ENST00000475218 (UPF3A-002) 114286385-114305808 processed_transcript
ENST00000479712 (UPF3A-009) 114286374-114291744 processed_transcript
ENST00000480362 (UPF3A-003) 114281720-114304949 processed_transcript
ENST00000481131 (UPF3A-008) 114285975-114291718 processed_transcript
ENST00000484246 (UPF3A-005) 114281645-114291757 processed_transcript
ENST00000492270 (UPF3A-006) 114281603-114282270 protein_coding
ENST00000493727 (UPF3A-004) 114281953-114301756 processed_transcript
ENST00000618700 (UPF3A-011) 114281637-114283729 retained_intron
ENST00000619079 (UPF3A-012) 114285077-114287617 retained_intron
ENSG00000265450 (MIR4502)
microRNA 4502 		ENST00000580432 (MIR4502-201) 114273828-114273908 miRNA
CIL_0001ED_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000038416-ENSMUSG00000038398 CGP 10090 8:13757676-13798538
GeneTranscriptPositionBiotype
ENSMUSG00000038398 (Upf3a)
UPF3 regulator of nonsense transcripts homolog A (yeast) 		ENSMUST00000043767 (Upf3a-201) 13785615-13798538 protein_coding
ENSMUSG00000038416 (Cdc16)
CDC16 cell division cycle 16 		ENSMUST00000043962 (Cdc16-001) 13757676-13781938 protein_coding
ENSMUST00000129872 (Cdc16-005) 13758767-13763010 retained_intron
ENSMUST00000130173 (Cdc16-004) 13757715-13766495 processed_transcript
ENSMUST00000134645 (Cdc16-002) 13757677-13763007 processed_transcript
ENSMUST00000137360 (Cdc16-003) 13779002-13781938 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001ED_0001ENSG00000130177ENST00000252457ENST00000252458ENST00000356221ENST00000360383ENST00000375308ENST00000375310ENST00000461716ENST00000484907ENST00000494581ENST00000494766ENSG00000169062ENST00000351487ENST00000375299ENST00000474056ENST00000475218ENST00000479712ENST00000480362ENST00000481131ENST00000484246ENST00000492270ENST00000493727ENST00000618700ENST00000619079ENSG00000265450ENST00000580432CIL_0001ED_0002ENSMUSG00000038398ENSMUST00000043767ENSMUSG00000038416ENSMUST00000043962ENSMUST00000129872ENSMUST00000130173ENSMUST00000134645ENSMUST00000137360
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001ED_0001ENSG00000130177ENST00000252457ENST00000252458ENST00000356221ENST00000360383ENST00000484907ENST00000494581ENST00000494766ENSG00000169062ENST00000351487ENST00000375299ENST00000475218ENST00000479712ENST00000480362ENST00000481131ENST00000493727ENST00000618700ENST00000619079ENSG00000265450ENST00000580432CIL_0001ED_0002ENSMUSG00000038398ENSMUST00000043767ENSMUSG00000038416ENSMUST00000043962ENSMUST00000137360
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000130177 ENST00000252457 N/A N/A N/A 2.670±0.00 N/A N/A 0.851±0.00 N/A N/A N/A 2.652±0.00 N/A 5.523±0.00 10.607±0.00
ENST00000252458 N/A 6.175±0.00 N/A 2.042±0.00 5.877±0.00 3.494±0.00 3.043±0.00 2.723±1.86 1.801±0.00 N/A N/A N/A 2.664±0.03 8.971±0.00
ENST00000356221 7.345±0.00 N/A N/A 2.843±0.00 3.910±2.43 6.234±0.00 6.648±0.00 9.530±0.00 3.937±1.22 5.066±0.00 4.190±1.68 20.329±12.18 14.594±2.38 16.202±6.59
ENST00000360383 6.261±0.00 8.416±0.00 0.853±0.00 3.487±0.00 7.074±5.38 1.754±0.03 N/A 5.291±0.00 5.720±0.00 N/A 2.449±0.00 5.343±0.00 2.551±0.00 14.384±0.00
ENST00000375308 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000375310 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000461716 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484907 N/A N/A 2.666±0.00 N/A 3.881±0.00 N/A N/A N/A 3.734±0.00 N/A N/A 4.835±0.00 N/A N/A
ENST00000494581 N/A N/A N/A N/A N/A N/A N/A 5.971±0.00 N/A N/A N/A N/A N/A N/A
ENST00000494766 N/A N/A N/A N/A 5.738±0.00 10.473±0.00 1.688±0.00 N/A N/A 7.825±0.00 1.713±0.00 N/A N/A N/A
ENSG00000169062 ENST00000351487 2.927±0.00 N/A N/A N/A 1.432±1.13 1.210±0.00 N/A 1.648±0.00 0.750±0.37 1.108±0.00 N/A 8.332±6.23 4.111±1.20 19.548±9.94
ENST00000375299 2.650±0.00 3.796±0.00 0.471±0.00 3.829±2.86 1.746±1.41 1.068±0.00 0.503±0.38 0.314±0.00 0.716±0.19 0.685±0.00 N/A 3.380±1.35 2.920±0.48 11.905±2.58
ENST00000474056 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475218 3.922±0.00 6.834±0.00 N/A 6.129±0.00 4.503±0.00 2.021±0.00 N/A 3.331±0.00 0.294±0.00 3.087±0.00 N/A 5.936±0.00 N/A 8.895±0.00
ENST00000479712 N/A N/A N/A N/A N/A 6.882±0.00 N/A N/A 3.362±0.00 7.867±0.00 N/A N/A N/A N/A
ENST00000480362 N/A N/A 0.487±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 6.447±0.00 3.215±0.00 N/A
ENST00000481131 N/A N/A N/A N/A 2.448±0.00 N/A 0.970±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000484246 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492270 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493727 N/A N/A 0.465±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 1.149±0.00 N/A N/A
ENST00000618700 N/A N/A N/A N/A N/A N/A N/A N/A 1.244±0.00 N/A N/A N/A N/A N/A
ENST00000619079 N/A 3.228±0.00 1.046±0.00 1.695±0.47 1.213±0.22 1.243±0.00 0.299±0.07 1.013±0.00 0.553±0.00 N/A 0.298±0.00 1.878±0.85 N/A N/A
ENSG00000265450 ENST00000580432 N/A 0.328±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000038398 ENSMUST00000043767 6.031±1.10 3.310±0.29 9.327±2.03 16.223±7.35 4.111±1.83 2.808±1.55 2.085±0.87 4.094±1.54 5.634±3.86 5.774±0.59 4.392±1.31 9.969±9.85 14.276±4.40 160.503±166.03
ENSMUSG00000038416 ENSMUST00000043962 24.458±5.60 21.464±11.75 24.090±3.23 35.396±14.90 23.290±2.79 16.326±2.46 11.002±0.56 17.054±1.90 14.582±6.86 16.862±2.06 9.165±0.36 45.879±11.87 34.873±9.34 5.564±1.01
ENSMUST00000129872 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130173 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134645 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137360 N/A N/A N/A 12.081±0.00 N/A N/A N/A N/A N/A N/A N/A 21.777±0.00 36.109±14.90 5.218±1.01

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