C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001FF_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000171109-ENSG00000114450 CGP 9606 3:179347692-179451590
GeneTranscriptPositionBiotype
ENSG00000114450 (GNB4)
guanine nucleotide binding protein (G protein), beta polypeptide 4 		ENST00000232564 (GNB4-001) 179399202-179451590 protein_coding
ENST00000465153 (GNB4-006) 179410325-179413730 processed_transcript
ENST00000466899 (GNB4-004) 179400849-179416526 protein_coding
ENST00000468623 (GNB4-003) 179401087-179451145 protein_coding
ENST00000497513 (GNB4-005) 179416521-179451476 protein_coding
ENSG00000171109 (MFN1)
mitofusin 1 		ENST00000263969 (MFN1-003) 179348761-179392496 protein_coding
ENST00000357390 (MFN1-002) 179347735-179393025 nonsense_mediated_decay
ENST00000466287 (MFN1-009) 179376922-179377432 retained_intron
ENST00000467174 (MFN1-005) 179348050-179362410 protein_coding
ENST00000471841 (MFN1-001) 179347692-179394931 protein_coding
ENST00000474903 (MFN1-004) 179362358-179392496 protein_coding
ENST00000480636 (MFN1-008) 179377130-179386498 retained_intron
ENST00000482661 (MFN1-007) 179377062-179378790 retained_intron
ENST00000489329 (MFN1-006) 179359720-179367498 protein_coding
ENSG00000269728 (RP11-145M9.4)
 ENST00000595265 (RP11-145M9.4-001) 179396089-179398177 lincRNA
ENSG00000272699 (RP11-145M9.5)
 ENST00000608131 (RP11-145M9.5-001) 179405448-179405944 antisense
CIL_0001FF_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027668-ENSMUSG00000027669 CGP 10090 3:32529465-32616585
GeneTranscriptPositionBiotype
ENSMUSG00000027668 (Mfn1)
mitofusin 1 		ENSMUST00000091257 (Mfn1-001) 32529465-32579239 protein_coding
ENSMUST00000118286 (Mfn1-007) 32531554-32577353 protein_coding
ENSMUST00000125182 (Mfn1-002) 32529531-32546946 retained_intron
ENSMUST00000137565 (Mfn1-005) 32531545-32544097 protein_coding
ENSMUST00000140328 (Mfn1-006) 32546495-32563134 retained_intron
ENSMUST00000147350 (Mfn1-004) 32529539-32546659 protein_coding
ENSMUST00000151320 (Mfn1-003) 32561546-32570330 protein_coding
ENSMUSG00000027669 (Gnb4)
guanine nucleotide binding protein (G protein), beta 4 		ENSMUST00000108234 (Gnb4-002) 32583998-32616517 protein_coding
ENSMUST00000143588 (Gnb4-006) 32599844-32616529 retained_intron
ENSMUST00000144292 (Gnb4-004) 32592211-32616525 retained_intron
ENSMUST00000152901 (Gnb4-003) 32583998-32616525 retained_intron
ENSMUST00000155737 (Gnb4-001) 32580332-32616585 protein_coding
ENSMUST00000184130 (Gnb4-005) 32585055-32616522 nonsense_mediated_decay

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001FF_0001ENSG00000114450ENST00000232564ENST00000465153ENST00000466899ENST00000468623ENST00000497513ENSG00000171109ENST00000263969ENST00000357390ENST00000466287ENST00000467174ENST00000471841ENST00000474903ENST00000480636ENST00000482661ENST00000489329ENSG00000269728ENST00000595265ENSG00000272699ENST00000608131CIL_0001FF_0002ENSMUSG00000027668ENSMUST00000091257ENSMUST00000118286ENSMUST00000125182ENSMUST00000137565ENSMUST00000140328ENSMUST00000147350ENSMUST00000151320ENSMUSG00000027669ENSMUST00000108234ENSMUST00000143588ENSMUST00000144292ENSMUST00000152901ENSMUST00000155737ENSMUST00000184130
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001FF_0001ENSG00000114450ENST00000232564ENST00000468623ENSG00000171109ENST00000263969ENST00000357390ENST00000467174ENST00000471841ENST00000474903ENSG00000269728ENST00000595265ENSG00000272699ENST00000608131CIL_0001FF_0002ENSMUSG00000027668ENSMUST00000091257ENSMUST00000118286ENSMUST00000140328ENSMUST00000151320ENSMUSG00000027669ENSMUST00000108234ENSMUST00000144292ENSMUST00000152901ENSMUST00000155737ENSMUST00000184130
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000114450 ENST00000232564 3.859±0.00 4.806±0.00 N/A 3.866±0.53 6.931±3.27 2.120±0.29 1.493±0.27 1.036±0.00 1.608±0.00 4.742±2.49 0.650±0.00 1.689±0.86 2.413±0.24 1.352±0.61
ENST00000465153 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466899 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468623 N/A N/A N/A N/A N/A 2.827±0.00 0.980±0.00 N/A 4.704±0.00 N/A N/A N/A N/A N/A
ENST00000497513 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000171109 ENST00000263969 0.971±0.00 N/A N/A 1.392±0.41 4.787±0.00 N/A 2.443±0.00 N/A N/A 1.299±0.46 N/A N/A 0.633±0.03 N/A
ENST00000357390 0.858±0.00 1.804±0.00 0.777±0.00 1.618±0.58 2.175±0.14 2.973±0.38 4.710±0.00 4.814±0.00 1.776±0.61 2.148±0.78 1.300±0.79 2.604±0.94 1.392±0.11 3.843±0.14
ENST00000466287 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467174 N/A N/A 4.600±0.00 N/A N/A N/A N/A 5.301±0.00 N/A N/A 5.103±0.00 N/A N/A N/A
ENST00000471841 2.713±0.00 3.235±0.00 2.275±0.00 1.915±0.90 2.827±0.23 1.224±0.00 3.337±0.70 2.873±0.27 2.720±1.44 1.137±0.00 1.032±0.73 1.915±1.02 0.961±0.67 2.214±0.23
ENST00000474903 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.624±0.00 1.208±0.00 4.020±0.00
ENST00000480636 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482661 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489329 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000269728 ENST00000595265 4.259±0.00 N/A 0.851±0.00 1.951±0.00 N/A 2.327±0.00 0.922±0.40 1.097±0.38 N/A 4.110±0.00 N/A 2.384±1.14 3.885±0.22 1.144±0.00
ENSG00000272699 ENST00000608131 0.020±0.00 0.422±0.00 N/A 0.389±0.35 0.467±0.26 0.530±0.00 0.111±0.00 0.074±0.00 N/A 0.613±0.00 N/A 0.335±0.16 0.143±0.04 0.473±0.46
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027668 ENSMUST00000091257 4.855±1.33 7.774±4.65 6.928±0.04 11.103±0.55 4.050±1.94 6.906±3.53 15.603±4.80 6.926±0.98 3.979±1.19 7.045±1.39 10.720±0.48 4.620±2.97 5.278±1.74 3.150±0.92
ENSMUST00000118286 N/A N/A 5.554±0.34 15.130±0.00 4.418±3.17 N/A 25.110±1.74 3.969±0.00 1.563±0.35 N/A 18.483±3.05 14.264±2.72 12.914±6.00 10.188±0.00
ENSMUST00000125182 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137565 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140328 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 27.881±0.00 39.804±0.00
ENSMUST00000147350 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151320 N/A N/A N/A N/A N/A N/A N/A 6.069±0.00 3.475±0.31 N/A N/A 5.008±0.00 N/A N/A
ENSMUSG00000027669 ENSMUST00000108234 3.945±0.00 4.566±2.78 4.705±0.38 4.408±0.10 3.757±2.14 1.199±0.00 1.549±0.00 1.299±0.00 1.171±0.34 5.568±0.00 0.949±0.14 3.057±0.83 15.045±8.34 0.333±0.05
ENSMUST00000143588 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144292 N/A N/A N/A N/A 1.731±0.00 N/A N/A N/A N/A N/A 0.213±0.00 1.708±0.92 2.570±0.00 0.077±0.00
ENSMUST00000152901 4.746±0.86 3.062±0.74 3.959±0.56 4.678±0.00 4.367±1.41 2.993±1.03 1.959±0.24 1.199±0.28 0.825±0.51 8.649±1.54 1.074±0.26 6.876±1.63 15.532±4.49 0.338±0.09
ENSMUST00000155737 2.687±0.94 1.620±0.54 2.974±0.09 4.506±2.51 2.143±0.35 1.398±0.17 1.368±0.26 1.195±0.19 0.457±0.20 4.213±0.53 0.549±0.26 3.511±1.05 4.095±2.22 0.148±0.06
ENSMUST00000184130 11.237±2.03 4.340±0.43 N/A 4.838±0.90 11.598±8.97 3.490±0.72 3.916±0.43 1.847±0.25 0.943±0.69 7.067±2.03 N/A 9.615±3.27 N/A 0.488±0.09

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