C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001FX_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000135702-ENSG00000205084 CGP 9606 16:75528535-75556286
GeneTranscriptPositionBiotype
ENSG00000135702 (CHST5)
carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 5 		ENST00000336257 (CHST5-001) 75528535-75535170 protein_coding
ENST00000565039 (CHST5-002) 75530105-75535247 protein_coding
ENSG00000205084 (TMEM231)
transmembrane protein 231 		ENST00000258173 (TMEM231-001) 75536744-75556286 protein_coding
ENST00000561809 (TMEM231-008) 75545977-75556262 retained_intron
ENST00000562410 (TMEM231-002) 75538136-75556268 nonsense_mediated_decay
ENST00000564318 (TMEM231-007) 75538350-75542044 retained_intron
ENST00000564576 (TMEM231-010) 75541374-75556245 processed_transcript
ENST00000565067 (TMEM231-004) 75539754-75556240 protein_coding
ENST00000568377 (TMEM231-005) 75538151-75556238 protein_coding
ENST00000569294 (TMEM231-009) 75540121-75555271 processed_transcript
ENST00000570006 (TMEM231-006) 75540009-75556233 nonsense_mediated_decay
ENST00000615437 (TMEM231-011) 75554923-75555925 protein_coding
ENSG00000260092 (RP11-77K12.7)
 ENST00000460606 (RP11-77K12.7-001) 75528532-75545428 nonsense_mediated_decay

Homo sapiens Ensembl (GRCh38)

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CIL_0001FX_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000183196-ENSG00000260092 CGP 9606 16:75472052-75545428
GeneTranscriptPositionBiotype
ENSG00000135702 (CHST5)
carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 5 		ENST00000336257 (CHST5-001) 75528535-75535170 protein_coding
ENST00000565039 (CHST5-002) 75530105-75535247 protein_coding
ENSG00000183196 (CHST6)
carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 6 		ENST00000332272 (CHST6-003) 75472052-75495028 protein_coding
ENST00000390664 (CHST6-001) 75478428-75495384 protein_coding
ENSG00000203472 (RP11-77K12.4)
 ENST00000530512 (RP11-77K12.4-001) 75475896-75495407 antisense
ENSG00000205084 (TMEM231)
transmembrane protein 231 		ENST00000258173 (TMEM231-001) 75536744-75556286 protein_coding
ENST00000561809 (TMEM231-008) 75545977-75556262 retained_intron
ENST00000562410 (TMEM231-002) 75538136-75556268 nonsense_mediated_decay
ENST00000564318 (TMEM231-007) 75538350-75542044 retained_intron
ENST00000564576 (TMEM231-010) 75541374-75556245 processed_transcript
ENST00000565067 (TMEM231-004) 75539754-75556240 protein_coding
ENST00000568377 (TMEM231-005) 75538151-75556238 protein_coding
ENST00000569294 (TMEM231-009) 75540121-75555271 processed_transcript
ENST00000570006 (TMEM231-006) 75540009-75556233 nonsense_mediated_decay
ENST00000615437 (TMEM231-011) 75554923-75555925 protein_coding
ENSG00000260092 (RP11-77K12.7)
 ENST00000460606 (RP11-77K12.7-001) 75528532-75545428 nonsense_mediated_decay
ENSG00000262583 (RP11-77K12.5)
 ENST00000571737 (RP11-77K12.5-002) 75504658-75516280 processed_transcript
ENST00000575421 (RP11-77K12.5-001) 75499788-75505283 transcribed_unprocessed_pseudogene
ENSG00000273971 (RP11-77K12.10)
 ENST00000612367 (RP11-77K12.10-001) 75497948-75498289 lincRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0001FX_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031952-ENSMUSG00000031951 CGP 10090 8:111889135-111933791
GeneTranscriptPositionBiotype
ENSMUSG00000031951 (Tmem231)
transmembrane protein 231 		ENSMUST00000034429 (Tmem231-201) 111912018-111933791 protein_coding
ENSMUSG00000031952 (Chst5)
carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 5 		ENSMUST00000034430 (Chst5-201) 111889135-111910199 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001FX_0001ENSG00000135702ENST00000336257ENST00000565039ENSG00000205084ENST00000258173ENST00000561809ENST00000562410ENST00000564318ENST00000564576ENST00000565067ENST00000568377ENST00000569294ENST00000570006ENST00000615437ENSG00000260092ENST00000460606CIL_0001FX_0002ENSG00000135702ENST00000336257ENST00000565039ENSG00000183196ENST00000332272ENST00000390664ENSG00000203472ENST00000530512ENSG00000205084ENST00000258173ENST00000561809ENST00000562410ENST00000564318ENST00000564576ENST00000565067ENST00000568377ENST00000569294ENST00000570006ENST00000615437ENSG00000260092ENST00000460606ENSG00000262583ENST00000571737ENST00000575421ENSG00000273971ENST00000612367CIL_0001FX_0003ENSMUSG00000031951ENSMUST00000034429ENSMUSG00000031952ENSMUST00000034430
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001FX_0001ENSG00000135702ENST00000336257ENSG00000205084ENST00000258173ENST00000562410ENST00000564318ENST00000568377ENSG00000260092ENST00000460606CIL_0001FX_0002ENSG00000135702ENST00000336257ENSG00000183196ENST00000332272ENST00000390664ENSG00000203472ENST00000530512ENSG00000205084ENST00000258173ENST00000562410ENST00000564318ENST00000568377ENSG00000260092ENST00000460606ENSG00000262583ENST00000571737ENST00000575421ENSG00000273971ENST00000612367CIL_0001FX_0003ENSMUSG00000031951ENSMUST00000034429ENSMUSG00000031952ENSMUST00000034430
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000135702 ENST00000336257 N/A N/A N/A N/A N/A 1.904±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565039 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000205084 ENST00000258173 N/A N/A N/A N/A 0.789±0.00 0.604±0.00 N/A N/A N/A N/A N/A 1.811±0.00 N/A N/A
ENST00000561809 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562410 N/A N/A 0.720±0.00 N/A N/A 1.607±0.00 N/A N/A N/A 3.801±0.00 N/A N/A N/A N/A
ENST00000564318 N/A N/A N/A N/A 1.506±0.00 N/A N/A N/A N/A N/A 0.253±0.00 0.720±0.00 N/A N/A
ENST00000564576 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565067 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568377 1.992±0.00 1.869±0.00 N/A 3.514±1.09 1.705±0.00 N/A 1.180±0.00 2.570±0.00 0.768±0.00 4.876±3.63 0.332±0.00 6.127±3.77 2.433±0.26 7.033±1.47
ENST00000569294 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000570006 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000615437 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000260092 ENST00000460606 N/A N/A N/A N/A N/A 3.712±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000135702 ENST00000336257 N/A N/A N/A N/A N/A 1.904±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565039 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000183196 ENST00000332272 0.103±0.00 0.246±0.00 0.015±0.00 1.382±0.22 0.064±0.03 N/A 0.085±0.07 0.154±0.00 0.016±0.00 0.560±0.05 0.014±0.01 0.166±0.15 0.081±0.04 N/A
ENST00000390664 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.539±0.00 N/A 1.312±0.00 N/A N/A
ENSG00000203472 ENST00000530512 0.358±0.00 1.198±0.00 N/A N/A 0.277±0.00 N/A 0.565±0.00 N/A N/A N/A 0.058±0.00 N/A N/A N/A
ENSG00000205084 ENST00000258173 N/A N/A N/A N/A 0.789±0.00 0.604±0.00 N/A N/A N/A N/A N/A 1.811±0.00 N/A N/A
ENST00000561809 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562410 N/A N/A 0.720±0.00 N/A N/A 1.607±0.00 N/A N/A N/A 3.801±0.00 N/A N/A N/A N/A
ENST00000564318 N/A N/A N/A N/A 1.506±0.00 N/A N/A N/A N/A N/A 0.253±0.00 0.720±0.00 N/A N/A
ENST00000564576 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565067 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568377 1.992±0.00 1.869±0.00 N/A 3.514±1.09 1.705±0.00 N/A 1.180±0.00 2.570±0.00 0.768±0.00 4.876±3.63 0.332±0.00 6.127±3.77 2.433±0.26 7.033±1.47
ENST00000569294 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000570006 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000615437 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000260092 ENST00000460606 N/A N/A N/A N/A N/A 3.712±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000262583 ENST00000571737 0.246±0.00 0.219±0.00 N/A 0.445±0.00 N/A N/A N/A N/A 0.041±0.00 N/A N/A 0.355±0.00 0.164±0.00 0.204±0.00
ENST00000575421 N/A N/A N/A N/A 0.030±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000273971 ENST00000612367 N/A 0.032±0.00 N/A 0.097±0.00 N/A 1.384±1.22 N/A N/A N/A 0.026±0.00 N/A 0.114±0.00 0.113±0.00 0.700±0.49
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031951 ENSMUST00000034429 3.122±1.81 5.917±0.78 4.070±0.03 4.699±1.84 2.290±0.68 3.092±0.47 0.946±0.04 5.855±1.16 0.562±0.52 4.719±0.58 0.450±0.08 6.079±1.57 1.690±0.41 6.548±3.08
ENSMUSG00000031952 ENSMUST00000034430 N/A 0.055±0.00 0.110±0.05 1.120±0.64 0.136±0.06 0.817±0.16 0.013±0.00 0.034±0.01 0.030±0.03 3.339±0.67 0.032±0.01 0.268±0.16 0.420±0.23 0.255±0.14

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