C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 231
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000034429 Tmem231-201 ENSMUSG00000031951 10090 - 8:111912018-111933791 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034429
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034429 3.122±1.81 5.917±0.78 4.070±0.03 4.699±1.84 2.290±0.68 3.092±0.47 0.946±0.04 5.855±1.16 0.562±0.52 4.719±0.58 0.450±0.08 6.079±1.57 1.690±0.41 6.548±3.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001FX CIL_0001FX_0003 CGP 8:111889135-111933791
CIL_000288 CIL_000288_0002 CGP 8:111912018-111953612

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001701 IMP in utero embryonic development
GO:0001944 IMP vasculature development
GO:0005515 IPI protein binding
GO:0007224 IMP smoothened signaling pathway
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0032880 IMP regulation of protein localization
GO:0035869 IDA ciliary transition zone
GO:0036038 IDA TCTN-B9D complex
GO:0042384 IMP cilium assembly
GO:0042733 IMP embryonic digit morphogenesis
GO:0043010 IMP camera-type eye development
GO:0060170 IDA ciliary membrane
GO:0060563 IMP neuroepithelial cell differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000258173 TMEM231-001 protein_coding Homo_sapiens 0 1007
ENST00000561809 TMEM231-008 retained_intron Homo_sapiens 0 207
ENST00000562410 TMEM231-002 nonsense_mediated_decay Homo_sapiens 0 634
ENST00000564318 TMEM231-007 retained_intron Homo_sapiens 0 324
ENST00000564576 TMEM231-010 processed_transcript Homo_sapiens 0 379
ENST00000565067 TMEM231-004 protein_coding Homo_sapiens 0 477
ENST00000568377 TMEM231-005 protein_coding Homo_sapiens 0 833
ENST00000570006 TMEM231-006 nonsense_mediated_decay Homo_sapiens 0 481
ENST00000575421 RP11-77K12.5-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 527

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