C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001I2_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000160193-ENSG00000160194 CGP 9606 21:42843094-42913304
GeneTranscriptPositionBiotype
ENSG00000160193 (WDR4)
WD repeat domain 4 		ENST00000330317 (WDR4-004) 42843094-42879531 protein_coding
ENST00000398208 (WDR4-001) 42849226-42879555 protein_coding
ENST00000463902 (WDR4-005) 42855684-42879546 processed_transcript
ENST00000470658 (WDR4-006) 42862282-42879510 processed_transcript
ENST00000476326 (WDR4-002) 42849226-42879568 processed_transcript
ENST00000479429 (WDR4-007) 42854562-42879515 processed_transcript
ENST00000492742 (WDR4-003) 42849226-42879275 processed_transcript
ENSG00000160194 (NDUFV3)
NADH dehydrogenase (ubiquinone) flavoprotein 3, 10kDa 		ENST00000340344 (NDUFV3-003) 42893268-42913304 protein_coding
ENST00000354250 (NDUFV3-002) 42893265-42909105 protein_coding
ENST00000460259 (NDUFV3-001) 42879644-42909105 processed_transcript
ENST00000460740 (NDUFV3-004) 42893321-42903931 processed_transcript

Homo sapiens Ensembl (GRCh38)

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CIL_0001I2_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000024037-ENSMUSG00000024038 CGP 10090 17:31494323-31531326
GeneTranscriptPositionBiotype
ENSMUSG00000024038 (Ndufv3)
NADH dehydrogenase (ubiquinone) flavoprotein 3 		ENSMUST00000046288 (Ndufv3-001) 31520158-31531326 protein_coding
ENSMUST00000064798 (Ndufv3-002) 31520115-31531323 protein_coding
ENSMUST00000185273 (Ndufv3-004) 31529093-31531326 processed_transcript
ENSMUST00000189436 (Ndufv3-005) 31520150-31527839 processed_transcript
ENSMUST00000191598 (Ndufv3-003) 31520185-31527242 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001I2_0001ENSG00000160193ENST00000330317ENST00000398208ENST00000463902ENST00000470658ENST00000476326ENST00000479429ENST00000492742ENSG00000160194ENST00000340344ENST00000354250ENST00000460259ENST00000460740CIL_0001I2_0002ENSMUSG00000024038ENSMUST00000046288ENSMUST00000064798ENSMUST00000185273ENSMUST00000189436ENSMUST00000191598
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001I2_0001ENSG00000160193ENST00000330317ENST00000398208ENST00000470658ENST00000476326ENST00000479429ENSG00000160194ENST00000340344ENST00000354250CIL_0001I2_0002ENSMUSG00000024038ENSMUST00000046288ENSMUST00000064798
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000160193 ENST00000330317 1.339±0.00 2.526±0.00 N/A 0.582±0.40 1.318±0.00 0.799±0.00 0.193±0.14 2.208±0.00 2.392±1.90 N/A N/A 3.389±3.02 2.335±0.40 1.745±0.66
ENST00000398208 N/A N/A N/A N/A N/A N/A N/A N/A 0.079±0.00 N/A 1.353±0.00 0.687±0.38 1.028±0.00 0.839±0.07
ENST00000463902 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470658 N/A N/A 0.379±0.00 N/A 1.371±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476326 N/A N/A N/A N/A N/A N/A 0.163±0.00 0.179±0.00 N/A N/A N/A N/A 0.574±0.00 N/A
ENST00000479429 1.236±0.00 N/A N/A N/A N/A 1.695±0.00 N/A N/A N/A N/A N/A 1.982±0.00 N/A 1.788±0.00
ENST00000492742 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000160194 ENST00000340344 3.338±0.00 4.591±0.00 0.193±0.00 2.227±1.06 3.764±2.56 1.726±1.22 3.938±2.54 3.195±1.80 2.484±0.00 1.601±0.00 6.607±3.97 2.257±1.24 2.127±0.08 2.545±1.18
ENST00000354250 7.737±0.00 11.034±0.00 1.551±0.00 3.336±1.24 8.138±4.48 6.216±4.91 12.470±11.04 8.994±5.66 7.175±5.11 3.905±3.14 30.604±26.55 8.158±5.28 8.520±2.00 11.577±5.02
ENST00000460259 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000460740 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024038 ENSMUST00000046288 11.206±1.03 6.427±0.79 17.504±1.53 7.433±2.49 8.328±1.52 6.766±0.38 N/A 15.640±1.07 6.562±1.94 5.498±0.30 3.917±0.00 9.907±4.91 12.118±2.56 1.338±0.15
ENSMUST00000064798 142.138±41.67 44.334±6.18 88.434±1.85 70.552±13.48 86.597±15.25 84.160±8.12 370.007±11.21 178.689±15.92 59.928±16.75 43.021±1.98 155.140±11.72 61.516±22.46 94.558±29.09 44.733±21.63
ENSMUST00000185273 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000189436 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000191598 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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