C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001IY_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000095203-ENSG00000070159 CGP 9606 9:109171975-109498313
GeneTranscriptPositionBiotype
ENSG00000095203 (EPB41L4B)
erythrocyte membrane protein band 4.1 like 4B 		ENST00000374557 (EPB41L4B-002) 109239731-109320964 protein_coding
ENST00000374566 (EPB41L4B-001) 109171975-109320964 protein_coding
ENSG00000237124 (MTND2P11)
MT-ND2 pseudogene 11 		ENST00000423638 (MTND2P11-001) 109300186-109301172 unprocessed_pseudogene
ENSG00000265647 (AL358815.1)
 ENST00000578641 (AL358815.1-201) 109266277-109266375 miRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0001IY_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000028434-ENSMUSG00000038764 CGP 10090 4:56991972-57301837
GeneTranscriptPositionBiotype
ENSMUSG00000028434 (Epb4.1l4b)
erythrocyte protein band 4.1-like 4b 		ENSMUST00000030142 (Epb4.1l4b-001) 57061726-57143437 protein_coding
ENSMUST00000044022 (Epb4.1l4b-003) 56995678-57027676 protein_coding
ENSMUST00000095076 (Epb4.1l4b-002) 56991972-57143437 protein_coding
ENSMUST00000133859 (Epb4.1l4b-005) 57088006-57120060 processed_transcript
ENSMUST00000136337 (Epb4.1l4b-004) 57078875-57138192 processed_transcript
ENSMUST00000149109 (Epb4.1l4b-006) 57073300-57103453 processed_transcript
ENSMUST00000150665 (Epb4.1l4b-007) 57063030-57070559 processed_transcript
ENSMUSG00000038764 (Ptpn3)
protein tyrosine phosphatase, non-receptor type 3 		ENSMUST00000075637 (Ptpn3-001) 57190841-57301837 protein_coding
ENSMUST00000123664 (Ptpn3-004) 57218347-57222054 processed_transcript
ENSMUST00000130900 (Ptpn3-002) 57265058-57301507 protein_coding
ENSMUST00000150445 (Ptpn3-006) 57254917-57300915 processed_transcript
ENSMUST00000151964 (Ptpn3-005) 57270050-57300756 protein_coding
ENSMUST00000153926 (Ptpn3-003) 57245051-57300375 protein_coding
ENSMUSG00000085967 (Gm12530)
predicted gene 12530 		ENSMUST00000152074 (Gm12530-001) 57172071-57176554 antisense

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001IY_0001ENSG00000095203ENST00000374557ENST00000374566ENSG00000237124ENST00000423638ENSG00000265647ENST00000578641CIL_0001IY_0002ENSMUSG00000028434ENSMUST00000030142ENSMUST00000044022ENSMUST00000095076ENSMUST00000133859ENSMUST00000136337ENSMUST00000149109ENSMUST00000150665ENSMUSG00000038764ENSMUST00000075637ENSMUST00000123664ENSMUST00000130900ENSMUST00000150445ENSMUST00000151964ENSMUST00000153926ENSMUSG00000085967ENSMUST00000152074
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001IY_0001ENSG00000095203ENST00000374557ENST00000374566ENSG00000237124ENST00000423638ENSG00000265647ENST00000578641CIL_0001IY_0002ENSMUSG00000028434ENSMUST00000030142ENSMUST00000095076ENSMUST00000149109ENSMUST00000150665ENSMUSG00000038764ENSMUST00000075637ENSMUSG00000085967ENSMUST00000152074
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000095203 ENST00000374557 12.979±0.00 0.152±0.00 1.243±0.00 N/A 10.626±0.00 10.646±6.16 N/A 5.726±1.35 9.879±8.90 3.001±0.71 0.205±0.16 9.024±7.03 2.138±1.73 8.371±0.23
ENST00000374566 1.863±0.00 0.104±0.00 N/A 4.388±0.69 2.028±0.00 N/A 1.499±1.16 N/A 0.162±0.00 N/A 0.168±0.00 0.670±0.00 N/A N/A
ENSG00000237124 ENST00000423638 N/A N/A N/A N/A 0.684±0.00 1.727±0.00 N/A N/A N/A N/A N/A 0.101±0.06 N/A N/A
ENSG00000265647 ENST00000578641 0.261±0.00 1.634±0.00 N/A 0.588±0.00 1.141±0.00 N/A 0.807±0.00 N/A N/A N/A 1.574±0.00 87.125±0.00 N/A 0.752±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028434 ENSMUST00000030142 1.634±0.92 0.256±0.17 16.318±0.77 0.562±0.00 4.486±1.15 35.549±2.51 0.399±0.14 5.778±1.55 8.799±7.34 13.923±4.19 0.518±0.08 4.637±1.43 4.339±2.17 0.774±0.21
ENSMUST00000044022 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000095076 0.038±0.00 0.044±0.01 N/A 2.479±0.66 N/A N/A 0.162±0.04 N/A N/A N/A 0.894±0.30 N/A N/A 0.213±0.02
ENSMUST00000133859 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136337 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149109 N/A 0.505±0.21 N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.413±1.74 8.488±0.00 N/A
ENSMUST00000150665 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.455±0.00 10.272±0.00 N/A
ENSMUSG00000038764 ENSMUST00000075637 0.687±0.19 N/A 2.647±0.00 0.206±0.00 1.154±0.00 3.774±1.43 1.602±0.58 1.618±0.33 1.040±0.58 0.957±0.45 N/A 1.075±0.55 0.710±0.21 N/A
ENSMUST00000123664 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130900 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150445 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151964 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153926 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000085967 ENSMUST00000152074 0.081±0.01 N/A N/A 0.008±0.00 0.125±0.10 0.052±0.02 0.165±0.03 0.030±0.01 0.004±0.00 0.145±0.02 N/A 0.110±0.04 0.106±0.09 1.107±0.74

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