C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001JD_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000028776-ENSDARG00000018806 CGP 7955 15:42329410-42383557
GeneTranscriptPositionBiotype
ENSDARG00000018806 (ctsc)
cathepsin C 		ENSDART00000022838 (ctsc-201) 42362040-42383557 protein_coding
ENSDARG00000028776 (rab38a)
RAB38a, member RAS oncogene family 		ENSDART00000040125 (rab38a-201) 42329410-42351716 protein_coding
CIL_0001JD_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000123892-ENSG00000109861 CGP 9606 11:88113242-88337787
GeneTranscriptPositionBiotype
ENSG00000109861 (CTSC)
cathepsin C 		ENST00000227266 (CTSC-001) 88293592-88337787 protein_coding
ENST00000393301 (CTSC-008) 88326365-88337700 processed_transcript
ENST00000524463 (CTSC-002) 88320811-88337761 protein_coding
ENST00000527018 (CTSC-004) 88296159-88337749 protein_coding
ENST00000528020 (CTSC-009) 88326086-88328198 protein_coding
ENST00000529974 (CTSC-003) 88326117-88337733 protein_coding
ENST00000533865 (CTSC-005) 88309284-88337740 processed_transcript
ENST00000533897 (CTSC-010) 88293788-88299755 retained_intron
ENST00000534131 (CTSC-007) 88334736-88337736 retained_intron
ENSG00000123892 (RAB38)
RAB38, member RAS oncogene family 		ENST00000243662 (RAB38-001) 88113242-88175467 protein_coding
ENST00000526372 (RAB38-002) 88113612-88175434 protein_coding
ENST00000531138 (RAB38-003) 88113464-88175433 protein_coding
ENSG00000255241 (RP11-164N3.3)
 ENST00000528458 (RP11-164N3.3-001) 88098591-88115835 antisense
ENSG00000279733 (RP11-685B24.1)
 ENST00000624727 (RP11-685B24.1-001) 88165575-88167691 TEC

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001JD_0001ENSDARG00000018806ENSDART00000022838ENSDARG00000028776ENSDART00000040125CIL_0001JD_0002ENSG00000109861ENST00000227266ENST00000393301ENST00000524463ENST00000527018ENST00000528020ENST00000529974ENST00000533865ENST00000533897ENST00000534131ENSG00000123892ENST00000243662ENST00000526372ENST00000531138ENSG00000255241ENST00000528458ENSG00000279733ENST00000624727
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001JD_0001ENSDARG00000018806ENSDART00000022838ENSDARG00000028776ENSDART00000040125CIL_0001JD_0002ENSG00000109861ENST00000227266ENST00000524463ENST00000533897ENSG00000123892ENST00000243662ENST00000526372ENST00000531138ENSG00000255241ENST00000528458ENSG00000279733ENST00000624727
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000018806 ENSDART00000022838 N/A N/A N/A 5.660±0.76 N/A N/A 38.472±15.03 50.380±18.82 2.267±0.00 N/A 14.807±0.00 N/A N/A N/A
ENSDARG00000028776 ENSDART00000040125 N/A N/A N/A 0.081±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000109861 ENST00000227266 14.204±0.00 33.728±0.00 9.895±0.00 5.926±0.00 17.432±3.73 16.003±2.14 5.958±4.95 38.302±34.13 14.167±0.35 57.038±14.17 3.600±2.42 13.420±4.35 107.592±23.95 14.088±0.00
ENST00000393301 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524463 1.131±0.00 2.629±0.00 0.787±0.00 0.506±0.41 1.408±0.12 1.838±0.28 0.299±0.18 0.319±0.00 0.925±0.00 N/A 0.396±0.00 1.054±0.02 N/A 0.983±0.51
ENST00000527018 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528020 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529974 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533865 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533897 N/A N/A N/A N/A 1.827±0.00 1.549±0.00 0.231±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000534131 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000123892 ENST00000243662 0.165±0.00 0.163±0.00 0.227±0.00 0.096±0.00 0.577±0.28 1.103±0.03 0.182±0.00 0.811±0.00 0.477±0.40 1.498±0.40 N/A 1.554±0.59 6.050±1.89 1.351±0.48
ENST00000526372 N/A N/A 0.147±0.00 0.158±0.00 1.148±0.00 N/A 0.027±0.00 0.650±0.00 0.515±0.00 0.583±0.00 N/A N/A N/A N/A
ENST00000531138 0.348±0.00 0.092±0.00 N/A 0.093±0.00 0.209±0.00 N/A N/A 0.320±0.00 0.228±0.00 N/A N/A N/A N/A 0.527±0.00
ENSG00000255241 ENST00000528458 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.245±0.07
ENSG00000279733 ENST00000624727 N/A N/A 0.070±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.032±0.00 0.091±0.00

Loading