C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001K3_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000100575-ENSG00000100578 CGP 9606 14:58408494-58551289
GeneTranscriptPositionBiotype
ENSG00000100575 (TIMM9)
translocase of inner mitochondrial membrane 9 homolog (yeast) 		ENST00000216463 (TIMM9-008) 58408603-58427527 processed_transcript
ENST00000395159 (TIMM9-001) 58408494-58427614 protein_coding
ENST00000555061 (TIMM9-004) 58408874-58412113 protein_coding
ENST00000555097 (TIMM9-012) 58410845-58427161 protein_coding
ENST00000555404 (TIMM9-003) 58409034-58427187 protein_coding
ENST00000555593 (TIMM9-002) 58408648-58427505 protein_coding
ENST00000555930 (TIMM9-010) 58408979-58427146 processed_transcript
ENST00000556007 (TIMM9-009) 58408664-58427114 protein_coding
ENST00000556367 (TIMM9-011) 58408880-58427174 processed_transcript
ENST00000557397 (TIMM9-005) 58408812-58427171 processed_transcript
ENSG00000100578 (KIAA0586)
KIAA0586 		ENST00000261244 (KIAA0586-002) 58427990-58548045 protein_coding
ENST00000354386 (KIAA0586-003) 58427385-58548023 protein_coding
ENST00000423743 (KIAA0586-004) 58427436-58548498 protein_coding
ENST00000538571 (KIAA0586-007) 58442706-58537219 processed_transcript
ENST00000554463 (KIAA0586-008) 58427728-58444019 protein_coding
ENST00000555203 (KIAA0586-012) 58427684-58444030 nonsense_mediated_decay
ENST00000555397 (KIAA0586-013) 58490205-58548119 protein_coding
ENST00000555833 (KIAA0586-010) 58427728-58448491 protein_coding
ENST00000556134 (KIAA0586-201) 58427385-58548828 protein_coding
ENST00000556235 (KIAA0586-015) 58539867-58548054 retained_intron
ENST00000557192 (KIAA0586-009) 58427722-58441280 processed_transcript
ENST00000557392 (KIAA0586-014) 58508571-58521200 processed_transcript
ENST00000557590 (KIAA0586-011) 58440971-58444047 retained_intron
ENST00000619416 (KIAA0586-001) 58427402-58551289 protein_coding
ENST00000619722 (KIAA0586-202) 58427385-58548828 protein_coding
ENSG00000252198 (Y_RNA)
Y RNA 		ENST00000516389 (Y_RNA.1-879) 58441844-58441992 misc_RNA
ENSG00000258650 (HSBP1P1)
heat shock factor binding protein 1 pseudogene 1 		ENST00000555205 (HSBP1P1-001) 58463971-58464136 processed_pseudogene
ENSG00000258900 (HNRNPCP1)
heterogeneous nuclear ribonucleoprotein C pseudogene 1 		ENST00000556181 (HNRNPCP1-001) 58521223-58521988 processed_pseudogene
ENSG00000278479 (AL139021.1)
 ENST00000611890 (AL139021.1-201) 58506587-58506695 miRNA

Homo sapiens Ensembl (GRCh38)

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Structures from Ensembl
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Transcripts
Structures from Ensembl
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CIL_0001K3_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021079-ENSMUSG00000034601 CGP 10090 12:71123173-71243303
GeneTranscriptPositionBiotype
ENSMUSG00000021078 (Tomm20l)
translocase of outer mitochondrial membrane 20 homolog (yeast)-like 		ENSMUST00000021482 (Tomm20l-201) 71111428-71123222 protein_coding
ENSMUSG00000021079 (Timm9)
translocase of inner mitochondrial membrane 9 		ENSMUST00000021486 (Timm9-201) 71123173-71136675 protein_coding
ENSMUST00000166120 (Timm9-202) 71123173-71136675 protein_coding
ENSMUSG00000034601 (2700049A03Rik)
RIKEN cDNA 2700049A03 gene 		ENSMUST00000045907 (2700049A03Rik-201) 71136848-71243303 protein_coding
ENSMUST00000129376 (2700049A03Rik-002) 71170589-71243299 protein_coding
ENSMUST00000134748 (2700049A03Rik-003) 71150434-71154887 nonsense_mediated_decay
ENSMUST00000149564 (2700049A03Rik-001) 71136848-71243303 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001K3_0001ENSG00000100575ENST00000216463ENST00000395159ENST00000555061ENST00000555097ENST00000555404ENST00000555593ENST00000555930ENST00000556007ENST00000556367ENST00000557397ENSG00000100578ENST00000261244ENST00000354386ENST00000423743ENST00000538571ENST00000554463ENST00000555203ENST00000555397ENST00000555833ENST00000556134ENST00000556235ENST00000557192ENST00000557392ENST00000557590ENST00000619416ENST00000619722ENSG00000252198ENST00000516389ENSG00000258650ENST00000555205ENSG00000258900ENST00000556181ENSG00000278479ENST00000611890CIL_0001K3_0002ENSMUSG00000021078ENSMUST00000021482ENSMUSG00000021079ENSMUST00000021486ENSMUST00000166120ENSMUSG00000034601ENSMUST00000045907ENSMUST00000129376ENSMUST00000134748ENSMUST00000149564
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001K3_0001ENSG00000100575ENST00000216463ENST00000395159ENST00000555061ENST00000555404ENST00000555593ENST00000555930ENST00000556007ENST00000556367ENST00000557397ENSG00000100578ENST00000261244ENST00000354386ENST00000538571ENST00000556134ENST00000619416ENST00000619722ENSG00000252198ENST00000516389ENSG00000258650ENST00000555205ENSG00000258900ENST00000556181ENSG00000278479ENST00000611890CIL_0001K3_0002ENSMUSG00000021078ENSMUST00000021482ENSMUSG00000021079ENSMUST00000021486ENSMUST00000166120ENSMUSG00000034601ENSMUST00000045907ENSMUST00000129376ENSMUST00000149564
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000100575 ENST00000216463 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.047±0.00 N/A
ENST00000395159 N/A N/A N/A N/A N/A N/A 1.185±0.00 N/A N/A N/A N/A 10.300±0.00 N/A N/A
ENST00000555061 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.769±0.00 N/A N/A N/A
ENST00000555097 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555404 N/A N/A N/A N/A N/A N/A N/A 4.436±0.00 N/A N/A N/A N/A N/A N/A
ENST00000555593 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 15.125±0.00 5.417±0.00 N/A
ENST00000555930 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.109±0.00 N/A N/A N/A
ENST00000556007 10.272±0.00 13.048±0.00 N/A 5.724±0.00 9.578±0.00 12.350±0.00 3.965±0.00 10.137±0.00 4.904±0.00 5.392±0.00 8.125±0.00 12.827±0.00 6.691±2.29 N/A
ENST00000556367 N/A N/A 3.373±0.00 6.150±0.00 N/A N/A N/A N/A N/A 7.569±0.00 N/A 12.935±0.00 5.088±0.00 N/A
ENST00000557397 15.492±0.00 20.899±0.00 N/A 9.990±0.00 12.652±0.00 19.980±0.00 5.426±0.00 16.592±0.00 8.924±0.00 12.634±0.00 13.448±0.00 N/A 5.614±0.00 23.527±0.00
ENSG00000100578 ENST00000261244 N/A N/A N/A N/A N/A 1.056±0.00 1.011±0.00 N/A N/A N/A N/A 1.181±0.00 0.482±0.00 2.675±0.00
ENST00000354386 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.265±0.00
ENST00000423743 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000538571 N/A N/A N/A N/A N/A N/A N/A N/A 0.733±0.00 0.737±0.00 N/A N/A N/A 7.948±4.50
ENST00000554463 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555203 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555397 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555833 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556134 N/A N/A N/A N/A 0.610±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556235 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557192 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557392 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557590 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000619416 N/A N/A N/A 0.384±0.00 0.543±0.00 N/A 0.424±0.00 N/A 0.420±0.00 0.469±0.00 0.421±0.19 0.795±0.07 0.486±0.00 N/A
ENST00000619722 N/A N/A N/A 0.529±0.00 0.595±0.00 N/A N/A N/A 0.770±0.32 N/A N/A 1.416±0.47 0.692±0.30 3.928±2.02
ENSG00000252198 ENST00000516389 0.547±0.00 0.379±0.00 N/A 0.227±0.00 N/A N/A 0.173±0.00 N/A N/A N/A N/A N/A N/A 0.177±0.00
ENSG00000258650 ENST00000555205 N/A N/A 1.641±0.00 N/A N/A 6.264±0.00 N/A N/A N/A N/A N/A N/A 0.192±0.00 0.345±0.00
ENSG00000258900 ENST00000556181 0.236±0.00 0.519±0.00 N/A 0.181±0.00 0.530±0.05 0.584±0.00 0.216±0.05 0.465±0.00 0.192±0.04 0.452±0.12 0.306±0.00 0.841±0.27 0.352±0.25 1.098±0.17
ENSG00000278479 ENST00000611890 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.522±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021078 ENSMUST00000021482 N/A 9.463±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 32.463±9.22
ENSMUSG00000021079 ENSMUST00000021486 2.364±0.63 3.320±0.81 3.471±0.00 6.113±1.02 1.048±0.27 1.476±0.50 1.547±0.54 3.528±0.88 6.586±3.54 1.345±0.77 3.489±0.58 4.991±1.32 7.168±2.03 N/A
ENSMUST00000166120 2.557±0.57 N/A 2.012±0.00 6.287±0.00 1.766±0.37 1.172±0.51 1.345±0.77 1.496±0.35 1.517±0.32 1.035±0.28 3.628±0.85 1.073±0.35 3.698±1.22 3.040±0.08
ENSMUSG00000034601 ENSMUST00000045907 0.687±0.23 0.844±0.08 0.461±0.00 1.005±0.54 0.764±0.20 0.697±0.02 0.198±0.01 0.288±0.08 0.288±0.13 0.426±0.24 0.396±0.12 1.002±0.40 0.567±0.38 N/A
ENSMUST00000129376 0.856±0.20 2.968±0.71 1.148±0.05 1.899±0.00 1.040±0.32 0.994±0.34 0.324±0.10 0.933±0.20 0.671±0.38 0.965±0.49 0.559±0.15 2.996±0.63 0.438±0.00 N/A
ENSMUST00000134748 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149564 0.475±0.09 0.618±0.16 0.998±0.00 1.415±1.05 0.389±0.11 0.571±0.13 0.336±0.06 0.521±0.14 1.021±0.74 0.753±0.22 0.183±0.06 1.248±0.56 1.473±0.87 13.086±4.26

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