C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: KIAA0586
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000619416 KIAA0586-001 ENSG00000100578 9606 + 14:58427402-58551289 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastHeartLiverLungMuscleOvaryPlacentaENST00000619416
Transcript ID Brain Breast Heart Liver Lung Muscle Ovary Placenta
ENST00000619416 0.384±0.00 0.543±0.00 0.424±0.00 0.420±0.00 0.469±0.00 0.421±0.19 0.795±0.07 0.486±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004IO CIL_0004IO_0001 CGP 14:58395916-58427614
CIL_0001K3 CIL_0001K3_0001 CGP 14:58408494-58551289
CIL_0001K6 CIL_0001K6_0001 CGP 14:58427385-58648321

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0005813 IDA centrosome
GO:0007224 IEA:ISS smoothened signaling pathway
GO:0036064 IDA ciliary basal body
GO:0042384 IMP cilium assembly
GO:0060271 ISS cilium morphogenesis
GO:0070201 IMP regulation of establishment of protein localization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000149564 2700049A03Rik-001 protein_coding Mus_musculus 0 2898
ENSMUST00000045907 2700049A03Rik-201 protein_coding Mus_musculus 0 2789
ENSMUST00000129376 2700049A03Rik-002 protein_coding Mus_musculus 0 1164
ENSMUST00000169308 0610011F06Rik-006 protein_coding Mus_musculus 0.0000009 62
ENSMUST00000110456 0610011F06Rik-005 nonsense_mediated_decay Mus_musculus 0.0000009 62

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