C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 2700049A03 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000149564 2700049A03Rik-001 ENSMUSG00000034601 10090 + 12:71136848-71243303 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000149564
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000149564 0.475±0.09 0.618±0.16 0.998±0.00 1.415±1.05 0.389±0.11 0.571±0.13 0.336±0.06 0.521±0.14 1.021±0.74 0.753±0.22 0.183±0.06 1.248±0.56 1.473±0.87 13.086±4.26

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001K3 CIL_0001K3_0002 CGP 12:71123173-71243303
CIL_0001K6 CIL_0001K6_0002 CGP 12:71136848-71320107

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0005813 ISS centrosome
GO:0007224 IMP smoothened signaling pathway
GO:0036064 ISO ciliary basal body
GO:0042384 ISO cilium assembly
GO:0060271 IMP cilium morphogenesis
GO:0070201 ISO regulation of establishment of protein localization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261244 KIAA0586-002 protein_coding Homo_sapiens 0 1637
ENST00000354386 KIAA0586-003 protein_coding Homo_sapiens 0 2615
ENST00000423743 KIAA0586-004 protein_coding Homo_sapiens 0 2615
ENST00000538571 KIAA0586-007 processed_transcript Homo_sapiens 0 2615
ENST00000554463 KIAA0586-008 protein_coding Homo_sapiens 0 407
ENST00000555833 KIAA0586-010 protein_coding Homo_sapiens 0 590
ENST00000556134 KIAA0586-201 protein_coding Homo_sapiens 0 2615
ENST00000619416 KIAA0586-001 protein_coding Homo_sapiens 0 2898
ENST00000619722 KIAA0586-202 protein_coding Homo_sapiens 0 2795

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