C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001KH_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000088356-ENSG00000260903 CGP 9606 20:31944342-32003387
GeneTranscriptPositionBiotype
ENSG00000088356 (PDRG1)
p53 and DNA-damage regulated 1 		ENST00000202017 (PDRG1-001) 31944342-31952092 protein_coding
ENSG00000260903 (XKR7)
XK, Kell blood group complex subunit-related family, member 7 		ENST00000562532 (XKR7-001) 31968002-32003387 protein_coding
ENSG00000278012 (RP1-310O13.13)
 ENST00000616850 (RP1-310O13.13-001) 31970181-31970831 sense_intronic
CIL_0001KH_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027472-ENSMUSG00000042631 CGP 10090 2:153008890-153055775
GeneTranscriptPositionBiotype
ENSMUSG00000027472 (Pdrg1)
p53 and DNA damage regulated 1 		ENSMUST00000028972 (Pdrg1-001) 153008890-153015427 protein_coding
ENSMUST00000123083 (Pdrg1-005) 153012383-153015362 nonsense_mediated_decay
ENSMUST00000124220 (Pdrg1-004) 153013351-153015377 retained_intron
ENSMUST00000140325 (Pdrg1-006) 153014015-153015342 processed_transcript
ENSMUST00000140853 (Pdrg1-002) 153010293-153015366 nonsense_mediated_decay
ENSMUST00000150545 (Pdrg1-003) 153008890-153015427 nonsense_mediated_decay
ENSMUST00000151392 (Pdrg1-008) 153009470-153012490 retained_intron
ENSMUST00000152072 (Pdrg1-007) 153012213-153015346 retained_intron
ENSMUSG00000042631 (Xkr7)
X Kell blood group precursor related family member 7 homolog 		ENSMUST00000037235 (Xkr7-001) 153031852-153055775 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001KH_0001ENSG00000088356ENST00000202017ENSG00000260903ENST00000562532ENSG00000278012ENST00000616850CIL_0001KH_0002ENSMUSG00000027472ENSMUST00000028972ENSMUST00000123083ENSMUST00000124220ENSMUST00000140325ENSMUST00000140853ENSMUST00000150545ENSMUST00000151392ENSMUST00000152072ENSMUSG00000042631ENSMUST00000037235
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001KH_0001ENSG00000088356ENST00000202017ENSG00000260903ENST00000562532ENSG00000278012ENST00000616850CIL_0001KH_0002ENSMUSG00000027472ENSMUST00000028972ENSMUST00000123083ENSMUST00000150545ENSMUST00000151392ENSMUST00000152072ENSMUSG00000042631ENSMUST00000037235
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000088356 ENST00000202017 2.563±0.00 6.636±0.00 0.444±0.00 4.455±3.14 2.396±1.55 3.117±2.70 1.581±1.50 4.576±4.27 1.843±1.59 3.452±3.31 1.028±0.56 9.388±7.09 9.440±1.83 34.941±12.09
ENSG00000260903 ENST00000562532 N/A 0.011±0.00 N/A 0.608±0.16 0.006±0.00 0.015±0.00 0.008±0.01 0.015±0.01 N/A 0.028±0.00 N/A 0.008±0.00 0.037±0.00 0.108±0.01
ENSG00000278012 ENST00000616850 N/A N/A N/A 0.292±0.09 N/A N/A N/A N/A N/A N/A N/A 0.050±0.00 N/A 0.189±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027472 ENSMUST00000028972 43.140±6.07 42.577±7.24 42.534±6.86 35.352±17.48 34.874±11.23 15.227±3.75 62.691±2.44 29.100±7.44 17.977±4.99 29.039±3.12 49.999±3.76 34.629±8.77 20.453±4.78 7.525±3.41
ENSMUST00000123083 N/A N/A N/A 42.282±0.00 N/A N/A N/A N/A N/A N/A N/A 112.238±0.00 N/A N/A
ENSMUST00000124220 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140325 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140853 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150545 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.817±0.00
ENSMUST00000151392 N/A N/A N/A 11.947±0.00 N/A N/A N/A N/A N/A N/A N/A 36.145±6.48 N/A 5.434±0.00
ENSMUST00000152072 N/A N/A N/A 20.328±0.00 N/A N/A N/A N/A N/A N/A N/A 71.593±0.00 61.378±16.21 6.088±0.00
ENSMUSG00000042631 ENSMUST00000037235 N/A 0.481±0.17 0.019±0.00 3.233±2.76 0.033±0.00 0.170±0.06 0.027±0.02 0.014±0.00 0.005±0.00 0.022±0.00 0.029±0.00 0.024±0.00 0.008±0.00 0.487±0.20

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