C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: p53 and DNA damage regulated 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000028972 Pdrg1-001 ENSMUSG00000027472 10090 - 2:153008890-153015427 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000028972
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000028972 43.140±6.07 42.577±7.24 42.534±6.86 35.352±17.48 34.874±11.23 15.227±3.75 62.691±2.44 29.100±7.44 17.977±4.99 29.039±3.12 49.999±3.76 34.629±8.77 20.453±4.78 7.525±3.41

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008K5 CIL_0008K5_0002 VISTA 2:152434876-153035572
CIL_00089Z CIL_00089Z_0002 VISTA 2:152488201-153091382
CIL_0008N4 CIL_0008N4_0002 VISTA 2:152517372-153118197
CIL_0001KI CIL_0001KI_0002 CGP 2:152962485-153015427
CIL_0001KH CIL_0001KH_0002 CGP 2:153008890-153055775

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005737 IEA cytoplasm
GO:0006457 IEA protein folding
GO:0008150 ND biological_process
GO:0016272 IEA prefoldin complex
GO:0051082 IEA unfolded protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000202017 PDRG1-001 protein_coding Homo_sapiens 0 527

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