C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001LF_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000108010-ENSG00000176769 CGP 9606 10:130136399-131311721
GeneTranscriptPositionBiotype
ENSG00000108010 (GLRX3)
glutaredoxin 3 		ENST00000331244 (GLRX3-001) 130136399-130179664 protein_coding
ENST00000368644 (GLRX3-002) 130136399-130182881 protein_coding
ENST00000481034 (GLRX3-003) 130136399-130184521 nonsense_mediated_decay
ENST00000486974 (GLRX3-005) 130159746-130160873 processed_transcript
ENST00000496195 (GLRX3-004) 130179374-130180382 processed_transcript
ENST00000619341 (GLRX3-006) 130180185-130183643 processed_transcript
ENSG00000176769 (TCERG1L)
transcription elongation regulator 1-like 		ENST00000368642 (TCERG1L-002) 131092391-131311721 protein_coding
ENST00000483040 (TCERG1L-001) 131092391-131260336 retained_intron
ENSG00000230098 (TCERG1L-AS1)
TCERG1L antisense RNA 1 		ENST00000436942 (TCERG1L-AS1-001) 131095218-131095777 antisense
ENSG00000236303 (RP11-540N6.1)
 ENST00000439421 (RP11-540N6.1-001) 130439067-130483154 lincRNA
ENSG00000276375 (RP11-339B9.1)
 ENST00000620178 (RP11-339B9.1-001) 130282445-130286604 unprocessed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0001LF_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031068-ENSMUSG00000091002 CGP 10090 7:137437648-138397730
GeneTranscriptPositionBiotype
ENSMUSG00000031068 (Glrx3)
glutaredoxin 3 		ENSMUST00000064404 (Glrx3-201) 137437648-137468594 protein_coding
ENSMUSG00000091002 (Tcerg1l)
transcription elongation regulator 1-like 		ENSMUST00000160436 (Tcerg1l-001) 138208974-138397728 protein_coding
ENSMUST00000161213 (Tcerg1l-002) 138209717-138271329 processed_transcript
ENSMUST00000162222 (Tcerg1l-003) 138258587-138397730 retained_intron

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001LF_0001ENSG00000108010ENST00000331244ENST00000368644ENST00000481034ENST00000486974ENST00000496195ENST00000619341ENSG00000176769ENST00000368642ENST00000483040ENSG00000230098ENST00000436942ENSG00000236303ENST00000439421ENSG00000276375ENST00000620178CIL_0001LF_0002ENSMUSG00000031068ENSMUST00000064404ENSMUSG00000091002ENSMUST00000160436ENSMUST00000161213ENSMUST00000162222
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001LF_0001ENSG00000108010ENST00000331244ENST00000368644ENST00000481034ENSG00000176769ENST00000368642ENST00000483040ENSG00000230098ENST00000436942ENSG00000236303ENST00000439421ENSG00000276375ENST00000620178CIL_0001LF_0002ENSMUSG00000031068ENSMUST00000064404ENSMUSG00000091002ENSMUST00000160436ENSMUST00000161213ENSMUST00000162222
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000108010 ENST00000331244 12.970±0.00 13.402±0.00 1.209±0.00 6.149±2.62 10.113±0.00 10.809±0.00 8.941±8.26 18.670±0.00 13.112±0.00 5.605±4.34 4.603±3.69 27.239±21.92 26.069±5.92 46.833±2.93
ENST00000368644 N/A 1.502±0.00 0.174±0.00 0.487±0.17 0.915±0.10 0.257±0.00 0.220±0.00 0.734±0.44 N/A 0.889±0.00 0.250±0.00 1.175±0.45 N/A N/A
ENST00000481034 N/A N/A N/A N/A N/A N/A 0.175±0.00 N/A N/A 0.376±0.00 N/A 6.300±4.91 N/A N/A
ENST00000486974 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496195 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000619341 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000176769 ENST00000368642 N/A N/A N/A 0.938±0.00 0.059±0.04 0.038±0.00 N/A 0.011±0.00 N/A N/A N/A 0.887±0.72 0.044±0.01 1.438±0.00
ENST00000483040 0.028±0.00 0.069±0.00 N/A 0.151±0.00 0.007±0.00 0.019±0.00 0.007±0.00 0.020±0.00 0.046±0.04 0.010±0.00 0.003±0.00 N/A N/A 0.333±0.00
ENSG00000230098 ENST00000436942 N/A N/A N/A 0.026±0.00 N/A N/A N/A N/A N/A 0.020±0.00 N/A 0.226±0.15 0.140±0.03 0.077±0.01
ENSG00000236303 ENST00000439421 N/A N/A N/A 0.088±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.072±0.00
ENSG00000276375 ENST00000620178 0.035±0.00 0.098±0.00 0.112±0.00 0.056±0.00 0.030±0.00 0.055±0.04 0.011±0.00 0.018±0.00 N/A 0.033±0.00 0.005±0.00 0.049±0.03 0.033±0.00 0.123±0.03
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031068 ENSMUST00000064404 15.528±2.82 6.839±4.02 25.342±3.40 40.183±5.79 12.214±3.60 12.114±1.76 17.406±2.13 17.607±4.22 20.739±8.99 10.697±1.03 37.966±16.62 21.151±13.90 48.729±24.09 91.722±11.21
ENSMUSG00000091002 ENSMUST00000160436 0.054±0.01 0.010±0.00 0.082±0.00 4.887±3.06 0.276±0.06 0.112±0.06 0.009±0.00 0.050±0.05 0.016±0.01 0.052±0.00 0.051±0.00 0.031±0.01 0.024±0.02 0.080±0.02
ENSMUST00000161213 N/A N/A N/A 8.096±0.00 N/A 0.090±0.03 N/A N/A 0.008±0.00 N/A 0.063±0.00 0.076±0.00 0.164±0.00 2.227±1.75
ENSMUST00000162222 0.023±0.00 0.078±0.07 N/A N/A 0.538±0.23 0.118±0.03 0.023±0.01 0.025±0.01 N/A 0.087±0.04 0.027±0.00 0.103±0.00 0.015±0.00 N/A

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