C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glutaredoxin 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000368644 GLRX3-002 ENSG00000108010 9606 + 10:130136399-130182881 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLungMuscleOvaryENST00000368644
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Lung Muscle Ovary
ENST00000368644 1.502±0.00 0.174±0.00 0.487±0.17 0.915±0.10 0.257±0.00 0.220±0.00 0.734±0.44 0.889±0.00 0.250±0.00 1.175±0.45

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007OP CIL_0007OP_0001 UCNEbase 10:128166009-130159815
CIL_0007UL CIL_0007UL_0001 VISTA 10:129592822-130194584
CIL_0001LF CIL_0001LF_0001 CGP 10:130136399-131311721

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002026 ISS regulation of the force of heart contraction
GO:0005080 IEA protein kinase C binding
GO:0005515 IPI protein binding
GO:0005681 IEA spliceosomal complex
GO:0007067 IEA mitotic nuclear division
GO:0009055 IEA electron carrier activity
GO:0010614 ISS negative regulation of cardiac muscle hypertrophy
GO:0015035 IEA protein disulfide oxidoreductase activity
GO:0030018 IEA Z disc
GO:0044822 IDA poly(A) RNA binding
GO:0045454 IEA cell redox homeostasis
GO:0046872 IEA metal ion binding
GO:0051536 IEA iron-sulfur cluster binding
GO:0055114 IEA oxidation-reduction process
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000064404 Glrx3-201 protein_coding Mus_musculus 0 1325
ENSMUST00000122162 RP23-239F1.2-001 processed_pseudogene Mus_musculus 0 1284

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