C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glutaredoxin 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000064404 Glrx3-201 ENSMUSG00000031068 10090 + 7:137437648-137468594 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000064404
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000064404 15.528±2.82 6.839±4.02 25.342±3.40 40.183±5.79 12.214±3.60 12.114±1.76 17.406±2.13 17.607±4.22 20.739±8.99 10.697±1.03 37.966±16.62 21.151±13.90 48.729±24.09 91.722±11.21

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007OP CIL_0007OP_0002 UCNEbase 7:135757037-137452523
CIL_0007UL CIL_0007UL_0002 VISTA 7:136950056-137551790
CIL_0001LF CIL_0001LF_0002 CGP 7:137437648-138397730

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002026 IMP regulation of the force of heart contraction
GO:0005080 IEA protein kinase C binding
GO:0005515 IPI protein binding
GO:0009055 IEA electron carrier activity
GO:0010614 IMP negative regulation of cardiac muscle hypertrophy
GO:0015035 IEA protein disulfide oxidoreductase activity
GO:0030018 IDA Z disc
GO:0044822 IEA poly(A) RNA binding
GO:0045454 IEA cell redox homeostasis
GO:0046872 IEA metal ion binding
GO:0051536 IEA iron-sulfur cluster binding
GO:0055114 IEA oxidation-reduction process
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000331244 GLRX3-001 protein_coding Homo_sapiens 0 1365
ENST00000368644 GLRX3-002 protein_coding Homo_sapiens 0 1325
ENST00000405027 GLRX3P2-001 processed_pseudogene Homo_sapiens 0 774
ENST00000481034 GLRX3-003 nonsense_mediated_decay Homo_sapiens 0 1325
ENST00000486974 GLRX3-005 processed_transcript Homo_sapiens 0 213

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