C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001LM_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000186766-ENSG00000180745 CGP 9606 10:127737235-127892947
GeneTranscriptPositionBiotype
ENSG00000180745 (CLRN3)
clarin 3 		ENST00000368671 (CLRN3-001) 127877841-127892947 protein_coding
ENSG00000186766 (FOXI2)
forkhead box I2 		ENST00000388920 (FOXI2-001) 127737235-127741186 protein_coding

Homo sapiens Ensembl (GRCh38)

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CIL_0001LM_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000048377-ENSMUSG00000050866 CGP 10090 7:135410367-135528654
GeneTranscriptPositionBiotype
ENSMUSG00000048377 (Foxi2)
forkhead box I2 		ENSMUST00000060356 (Foxi2-201) 135410367-135413615 protein_coding
ENSMUSG00000050866 (Clrn3)
clarin 3 		ENSMUST00000053716 (Clrn3-201) 135511466-135528654 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisCIL_0001LM_0001ENSG00000180745ENST00000368671ENSG00000186766ENST00000388920CIL_0001LM_0002ENSMUSG00000048377ENSMUST00000060356ENSMUSG00000050866ENSMUST00000053716
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisCIL_0001LM_0001ENSG00000180745ENST00000368671ENSG00000186766ENST00000388920CIL_0001LM_0002ENSMUSG00000048377ENSMUST00000060356ENSMUSG00000050866ENSMUST00000053716
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSG00000180745 ENST00000368671 0.305±0.00 0.022±0.00 0.497±0.00 0.225±0.00 0.894±0.81 3.396±0.09 0.070±0.00 7.704±2.52 10.080±0.00 0.047±0.00 8.764±6.14 0.090±0.02 0.048±0.02
ENSG00000186766 ENST00000388920 0.117±0.00 0.280±0.00 0.367±0.00 N/A 0.111±0.00 0.039±0.00 0.046±0.00 0.460±0.00 0.013±0.00 0.130±0.00 0.069±0.02 N/A 0.085±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUSG00000048377 ENSMUST00000060356 N/A 0.015±0.00 N/A 0.005±0.00 N/A N/A N/A N/A N/A N/A 0.033±0.00 0.012±0.00 0.044±0.01
ENSMUSG00000050866 ENSMUST00000053716 0.027±0.00 N/A 0.002±0.00 0.002±0.00 0.011±0.00 22.176±3.87 N/A 13.475±3.16 0.021±0.01 0.129±0.09 0.073±0.04 0.795±0.81 0.015±0.01

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