C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: clarin 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000050866 Clrn3 10090 - 7:135511466-135528654 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000053716 Clrn3-201 135511466-135528654 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000053716
Transcript ID Adipose Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000053716 0.027±0.00 0.002±0.00 0.002±0.00 0.011±0.00 22.176±3.87 13.475±3.16 0.021±0.01 0.129±0.09 0.073±0.04 0.795±0.81 0.015±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001LM CIL_0001LM_0002 CGP 7:135410367-135528654
CIL_00083E CIL_00083E_0002 VISTA 7:135456830-136057856
CIL_0001LJ CIL_0001LJ_0002 CGP 7:135511466-135686294

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000091434 CLRN3 clarin 3 protein_coding Danio_rerio
ENSG00000180745 CLRN3 clarin 3 protein_coding Homo_sapiens

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