C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: clarin 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000180745 CLRN3 9606 - 10:127877841-127892947 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000368671 CLRN3-001 127877841-127892947 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000368671
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000368671 0.305±0.00 0.022±0.00 0.497±0.00 0.225±0.00 0.894±0.81 3.396±0.09 0.070±0.00 7.704±2.52 10.080±0.00 0.047±0.00 8.764±6.14 0.090±0.02 0.048±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001LM CIL_0001LM_0001 CGP 10:127737235-127892947
CIL_00083E CIL_00083E_0001 VISTA 10:127865799-128466830
CIL_0001LJ CIL_0001LJ_0001 CGP 10:127877841-128085855

Gene Ontology
GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000091434 CLRN3 clarin 3 protein_coding Danio_rerio
ENSMUSG00000050866 Clrn3 clarin 3 protein_coding Mus_musculus

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