C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001NT_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000062146-ENSDARG00000062154 CGP 7955 24:27868052-28093295
GeneTranscriptPositionBiotype
ENSDARG00000062146 (larp4b)
La ribonucleoprotein domain family, member 4B 		ENSDART00000089506 (larp4b-001) 27868052-27889794 protein_coding
CIL_0001NT_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000033499-ENSMUSG00000048264 CGP 10090 13:9093881-9668928
GeneTranscriptPositionBiotype
ENSMUSG00000033499 (Larp4b)
La ribonucleoprotein domain family, member 4B 		ENSMUST00000091829 (Larp4b-002) 9093982-9174451 protein_coding
ENSMUST00000188211 (Larp4b-001) 9093881-9171104 protein_coding
ENSMUST00000188523 (Larp4b-006) 9136215-9143765 processed_transcript
ENSMUST00000188939 (Larp4b-003) 9093907-9171296 protein_coding
ENSMUST00000189330 (Larp4b-005) 9168361-9173121 retained_intron
ENSMUST00000190041 (Larp4b-008) 9093912-9123931 protein_coding
ENSMUST00000190331 (Larp4b-007) 9136435-9137200 processed_transcript
ENSMUSG00000048264 (Dip2c)
DIP2 disco-interacting protein 2 homolog C (Drosophila) 		ENSMUST00000166299 (Dip2c-201) 9276982-9666178 protein_coding
ENSMUST00000169960 (Dip2c-002) 9276933-9666178 protein_coding
ENSMUST00000174552 (Dip2c-001) 9276528-9668928 protein_coding
ENSMUSG00000088366 (Gm23496)
predicted gene, 23496 		ENSMUST00000157741 (Gm23496-201) 9623380-9623627 misc_RNA
ENSMUSG00000088442 (Gm23553)
predicted gene, 23553 		ENSMUST00000157817 (Gm23553-201) 9109305-9109599 misc_RNA
ENSMUSG00000097859 (Gm26601)
predicted gene, 26601 		ENSMUST00000181427 (Gm26601-201) 9387139-9391741 lincRNA
ENSMUSG00000099428 (RP23-127L14.1)
predicted gene 28155 		ENSMUST00000191066 (RP23-127L14.1-001) 9140731-9140881 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001NT_0001ENSDARG00000062146ENSDART00000089506CIL_0001NT_0002ENSMUSG00000033499ENSMUST00000091829ENSMUST00000188211ENSMUST00000188523ENSMUST00000188939ENSMUST00000189330ENSMUST00000190041ENSMUST00000190331ENSMUSG00000048264ENSMUST00000166299ENSMUST00000169960ENSMUST00000174552ENSMUSG00000088366ENSMUST00000157741ENSMUSG00000088442ENSMUST00000157817ENSMUSG00000097859ENSMUST00000181427ENSMUSG00000099428ENSMUST00000191066
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001NT_0001ENSDARG00000062146ENSDART00000089506CIL_0001NT_0002ENSMUSG00000033499ENSMUST00000091829ENSMUST00000188211ENSMUST00000188939ENSMUST00000189330ENSMUSG00000048264ENSMUST00000166299ENSMUST00000169960ENSMUST00000174552ENSMUSG00000088366ENSMUST00000157741ENSMUSG00000088442ENSMUST00000157817ENSMUSG00000097859ENSMUST00000181427ENSMUSG00000099428ENSMUST00000191066
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000062146 ENSDART00000089506 N/A N/A N/A 6.517±0.00 N/A N/A 2.262±1.55 2.320±0.00 1.124±0.00 N/A 1.837±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000033499 ENSMUST00000091829 5.255±2.72 7.559±3.01 10.054±0.09 8.801±1.43 3.378±0.85 9.259±0.88 2.185±1.27 2.232±0.32 7.646±4.49 5.318±4.21 6.555±3.53 2.304±0.63 5.860±2.47 N/A
ENSMUST00000188211 7.628±0.95 5.030±1.12 4.841±0.00 5.759±1.14 4.468±1.36 6.905±1.51 N/A N/A 5.864±1.98 5.632±0.60 N/A 5.277±2.45 11.726±1.61 2.479±0.49
ENSMUST00000188523 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000188939 N/A 6.632±1.86 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000189330 N/A N/A N/A N/A N/A N/A N/A N/A 1.588±0.00 2.458±0.04 N/A 2.613±0.61 N/A N/A
ENSMUST00000190041 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000190331 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000048264 ENSMUST00000166299 1.155±0.00 1.481±0.59 N/A N/A 1.401±0.92 0.708±0.11 N/A 1.011±0.21 0.523±0.20 N/A N/A 3.039±1.28 N/A 0.313±0.04
ENSMUST00000169960 2.703±1.22 1.726±0.43 N/A 1.580±0.00 1.611±0.54 1.234±0.42 3.198±0.86 1.561±0.22 0.543±0.21 3.293±0.33 N/A 4.229±1.77 1.425±0.28 0.810±0.20
ENSMUST00000174552 3.253±1.56 0.976±0.24 4.012±1.35 7.476±2.43 1.552±0.55 1.716±0.47 5.954±0.82 2.905±0.89 0.670±0.41 4.831±0.22 1.342±0.43 4.123±1.48 1.106±0.36 0.676±0.31
ENSMUSG00000088366 ENSMUST00000157741 0.486±0.00 N/A N/A 0.444±0.14 N/A N/A 0.357±0.00 0.524±0.19 N/A N/A N/A 1.559±0.00 0.057±0.00 N/A
ENSMUSG00000088442 ENSMUST00000157817 0.326±0.04 N/A 0.192±0.06 0.466±0.22 N/A 1.127±0.00 0.235±0.00 0.241±0.00 0.466±0.25 N/A N/A N/A 0.404±0.32 0.553±0.00
ENSMUSG00000097859 ENSMUST00000181427 0.088±0.05 0.269±0.14 0.289±0.01 0.467±0.22 0.062±0.04 0.071±0.03 0.075±0.04 0.126±0.07 0.041±0.03 0.108±0.05 0.013±0.01 0.276±0.28 0.056±0.06 0.022±0.00
ENSMUSG00000099428 ENSMUST00000191066 N/A N/A 3.353±0.00 N/A N/A N/A N/A N/A 5.013±0.00 N/A N/A 6.031±0.00 N/A N/A

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