C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001OR_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000078270-ENSDARG00000009764 CGP 7955 5:55521773-55793666
GeneTranscriptPositionBiotype
ENSDARG00000009764 (srek1)
splicing regulatory glutamine/lysine-rich protein 1 		ENSDART00000016995 (srek1-201) 55752734-55793666 protein_coding
ENSDART00000121459 (srek1-202) 55606217-55793666 protein_coding
ENSDART00000134937 (srek1-001) 55752842-55793666 protein_coding
ENSDARG00000078270 (mast4)
microtubule associated serine/threonine kinase family member 4 		ENSDART00000088325 (mast4-201) 55521773-55566876 protein_coding
CIL_0001OR_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000034751-ENSMUSG00000032621 CGP 10090 13:102732486-103764504
GeneTranscriptPositionBiotype
ENSMUSG00000021624 (Cd180)
CD180 antigen 		ENSMUST00000022124 (Cd180-001) 102693558-102706955 protein_coding
ENSMUST00000167144 (Cd180-003) 102693573-102705066 protein_coding
ENSMUST00000170878 (Cd180-005) 102693579-102739629 protein_coding
ENSMUST00000171267 (Cd180-002) 102693565-102704262 protein_coding
ENSMUST00000172138 (Cd180-004) 102693611-102739504 protein_coding
ENSMUSG00000032621 (Srek1)
splicing regulatory glutamine/lysine-rich protein 1 		ENSMUST00000074616 (Srek1-201) 103741615-103764504 protein_coding
ENSMUSG00000047643 (Gm5454)
predicted gene 5454 		ENSMUST00000052030 (Gm5454-201) 103356250-103357704 processed_pseudogene
ENSMUSG00000090329 (Gm17160)
predicted gene 17160 		ENSMUST00000170645 (Gm17160-001) 102762435-102764785 antisense
ENSMUSG00000091577 (Gm6211)
predicted gene 6211 		ENSMUST00000147973 (Gm6211-002) 103159795-103164069 processed_transcript
ENSMUST00000167849 (Gm6211-001) 103159914-103160838 transcribed_processed_pseudogene
ENSMUSG00000095940 (Gm16416)
predicted gene 16416 		ENSMUST00000179660 (Gm16416-201) 103397109-103397591 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001OR_0001ENSDARG00000009764ENSDART00000016995ENSDART00000121459ENSDART00000134937ENSDARG00000078270ENSDART00000088325CIL_0001OR_0002ENSMUSG00000021624ENSMUST00000022124ENSMUST00000167144ENSMUST00000170878ENSMUST00000171267ENSMUST00000172138ENSMUSG00000032621ENSMUST00000074616ENSMUSG00000047643ENSMUST00000052030ENSMUSG00000090329ENSMUST00000170645ENSMUSG00000091577ENSMUST00000147973ENSMUST00000167849ENSMUSG00000095940ENSMUST00000179660
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001OR_0001ENSDARG00000009764ENSDART00000016995ENSDART00000121459ENSDART00000134937ENSDARG00000078270ENSDART00000088325CIL_0001OR_0002ENSMUSG00000021624ENSMUST00000022124ENSMUSG00000032621ENSMUST00000074616ENSMUSG00000047643ENSMUST00000052030ENSMUSG00000090329ENSMUST00000170645ENSMUSG00000091577ENSMUST00000147973ENSMUST00000167849ENSMUSG00000095940ENSMUST00000179660
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000009764 ENSDART00000016995 N/A N/A N/A N/A N/A N/A 1.674±0.12 0.731±0.00 0.008±0.00 N/A N/A N/A N/A N/A
ENSDART00000121459 N/A N/A N/A N/A N/A N/A 2.167±0.00 1.093±0.00 0.008±0.00 N/A 2.015±0.00 N/A N/A N/A
ENSDART00000134937 N/A N/A N/A 8.696±0.00 N/A N/A 1.613±0.00 N/A 0.008±0.00 N/A N/A N/A N/A N/A
ENSDARG00000078270 ENSDART00000088325 N/A N/A N/A 6.808±0.00 N/A N/A 0.225±0.15 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021624 ENSMUST00000022124 N/A N/A N/A N/A 7.212±3.14 N/A N/A 1.352±0.17 1.030±0.17 N/A N/A N/A N/A N/A
ENSMUST00000167144 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000170878 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000171267 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000172138 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000032621 ENSMUST00000074616 2.824±0.77 3.095±0.78 25.641±1.84 14.591±0.13 2.179±0.97 2.905±1.13 1.194±0.61 1.948±1.05 6.646±3.70 2.617±1.05 3.763±0.66 6.135±3.85 9.260±4.12 2.107±0.21
ENSMUSG00000047643 ENSMUST00000052030 0.186±0.05 0.267±0.12 0.108±0.05 0.309±0.18 0.166±0.10 0.193±0.11 0.115±0.07 0.122±0.07 0.023±0.02 0.219±0.06 0.024±0.01 0.172±0.07 N/A 0.112±0.05
ENSMUSG00000090329 ENSMUST00000170645 0.952±0.10 N/A 1.086±0.00 0.318±0.07 N/A N/A N/A N/A 0.222±0.00 N/A 0.353±0.00 N/A 0.356±0.17 1.990±1.30
ENSMUSG00000091577 ENSMUST00000147973 0.080±0.03 0.242±0.09 0.027±0.01 0.091±0.05 0.061±0.03 0.039±0.02 0.044±0.03 0.079±0.05 0.038±0.04 0.097±0.03 0.010±0.01 0.465±0.28 0.027±0.02 0.059±0.02
ENSMUST00000167849 0.047±0.00 0.215±0.07 0.032±0.02 N/A 0.134±0.01 N/A N/A 0.066±0.01 0.005±0.00 N/A N/A 0.345±0.00 0.072±0.00 0.130±0.06
ENSMUSG00000095940 ENSMUST00000179660 N/A N/A 0.057±0.03 0.091±0.00 N/A N/A N/A N/A 0.009±0.00 N/A N/A 0.183±0.07 0.251±0.19 1.692±1.59

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